RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CPOQ8IVL8 374 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 OR51L1Q8NGJ5 315 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 FAM81AQ8TBF8 368 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 PIK3IP1Q96FE7 263 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 GRIP2Q9C0E4 1043 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 OR51V1Q9H2C8 321 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 RNF121Q9H920 327 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 HINT3Q9NQE9 182 aaKnown RBP12.82□□□□□ -0.36
PNKP-221ENST00000627317 NPAP1Q9NZP6 1156 aa12.82□□□□□ -0.36
PNKP-221ENST00000627317 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.81□□□□□ -0.36
PNKP-221ENST00000627317 ZNF503-AS2A6NEH8 195 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 PRKYO43930 277 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 MPZL1O95297 269 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 CST2P09228 141 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 PATE4P0C8F1 98 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 CLUP10909 449 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 CBR1P16152 277 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 FMO3P31513 532 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 GGT2P36268 569 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 ARR3P36575 388 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 PTDSS1P48651 473 aaKnown RBP12.81□□□□□ -0.36
PNKP-221ENST00000627317 IDH3GP51553 393 aaPredicted RBP12.81□□□□□ -0.36
PNKP-221ENST00000627317 ART1P52961 327 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 PCBD1P61457 104 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 HSF2Q03933 536 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 KLHL12Q53G59 568 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 TCEANCQ8N8B7 351 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 ZNF555Q8NEP9 628 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 SLC26A10Q8NG04 563 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 C11orf40Q8WZ69 217 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 PLPPR2Q96GM1 343 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 IL4I1Q96RQ9 567 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 ZNF416Q9BWM5 594 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 HCAR1Q9BXC0 346 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 VCX3BQ9H321 246 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 ESRP2Q9H6T0 727 aaKnown RBP12.81□□□□□ -0.36
PNKP-221ENST00000627317 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 ZNF224Q9NZL3 707 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 FBXL3Q9UKT7 428 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 GMPPBQ9Y5P6 360 aa12.81□□□□□ -0.36
PNKP-221ENST00000627317 PRODHO43272 600 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 TLX2O43763 284 aaPredicted RBP12.8□□□□□ -0.36
PNKP-221ENST00000627317 RAF1P04049 648 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 ZNF823P16415 610 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 ZNF32P17041 273 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 CD53P19397 219 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 BLVRAP53004 296 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 RPS7P62081 194 aaKnown RBP12.8□□□□□ -0.36
PNKP-221ENST00000627317 LSM6P62312 80 aaKnown RBP12.8□□□□□ -0.36
PNKP-221ENST00000627317 RAB1AP62820 205 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 TEKQ02763 1124 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 BSPH1Q075Z2 132 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 AQP6Q13520 282 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 ENDOGQ14249 297 aaKnown RBP12.8□□□□□ -0.36
PNKP-221ENST00000627317 KCNMB1Q16558 191 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 MEP1BQ16820 701 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 OTPQ5XKR4 325 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 UGT2A3Q6UWM9 527 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 FAM169BQ8N8A8 192 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 FGFBP3Q8TAT2 258 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 TMEM163Q8TC26 289 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 CYGBQ8WWM9 190 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 FBXO17Q96EF6 278 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 HRASLS5Q96KN8 279 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 PITX2Q99697 317 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 KCNS3Q9BQ31 491 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 B3GNT2Q9NY97 397 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 MOKQ9UQ07 419 aa12.8□□□□□ -0.36
PNKP-221ENST00000627317 PRRC2AP48634 2157 aaKnown RBP12.8□□□□□ -0.36
PNKP-221ENST00000627317 IGHV1-18A0A0C4DH31 117 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 TVP23AA6NH52 213 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 GLCEO94923 617 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 IGKV3-15P01624 115 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 TFP02787 698 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 SCG5P05408 212 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 CD3EP07766 207 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 PTAFRP25105 342 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 GSTT1P30711 240 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 ADAM8P78325 824 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 PLP2Q04941 152 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 SCRN3Q0VDG4 424 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 APOFQ13790 326 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 C3orf36Q3SXR2 165 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 SLC35D3Q5M8T2 416 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 NCMAPQ5T1S8 102 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 LYPD4Q6UWN0 246 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 DEPDC4Q8N2C3 294 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 BBS1Q8NFJ9 593 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 OR8J1Q8NGP2 316 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 ZNRF4Q8WWF5 429 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 PTP4A1Q93096 173 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 TMEM204Q9BSN7 226 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 WACQ9BTA9 647 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 FAM118AQ9NWS6 357 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 H2AFY2Q9P0M6 372 aaPredicted RBP12.79□□□□□ -0.36
PNKP-221ENST00000627317 CRNNQ9UBG3 495 aaPredicted RBP12.79□□□□□ -0.36
PNKP-221ENST00000627317 ASH2LQ9UBL3 628 aa12.79□□□□□ -0.36
PNKP-221ENST00000627317 KCNG2Q9UJ96 466 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms