RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 OR51A4Q8NGJ6 313 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 OR8S1Q8NH09 359 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 PATE1Q8WXA2 126 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 MOGAT1Q96PD6 335 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 PLA2G2FQ9BZM2 168 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 TMEM185BQ9H7F4 350 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 SFXN1Q9H9B4 322 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 GHRLQ9UBU3 117 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 PCDHB10Q9UN67 800 aa7.87□□□□□ -1.15
VCL-207ENST00000624354 MRPS33Q9Y291 106 aaKnown RBP7.87□□□□□ -1.15
VCL-207ENST00000624354 EP300Q09472 2414 aaPredicted RBP7.87□□□□□ -1.15
VCL-207ENST00000624354 KANTRA0A1W2PQU2 76 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 C1orf196B1AJZ1 125 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 C5orf67F2Z3F1 127 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 H7C1C5 153 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 TXNL1O43396 289 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 SRPX2O60687 465 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 RENP00797 406 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 CT45A8P0DMV1 189 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 CT45A9P0DMV2 189 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ADCYAP1P18509 176 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ALOX5APP20292 161 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 NTSR1P30989 418 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 GDI1P31150 447 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RPS27P42677 84 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 ACTBP60709 375 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 LCN6P62502 163 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ACTG1P63261 375 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 SGCAQ16586 387 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 HYAL4Q2M3T9 481 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 EIF2S3LQ2VIR3 472 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 DEFB110Q30KQ9 67 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 CT45A2Q5DJT8 189 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 TMEM196Q5HYL7 178 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 STEAP1BQ6NZ63 245 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 OR2W3Q7Z3T1 314 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 WDSUB1Q8N9V3 476 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 OR1S2Q8NGQ3 325 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 BMFQ96LC9 184 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 DCBLD2Q96PD2 775 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 DGAT2Q96PD7 388 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RPP25Q9BUL9 199 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 ULBP3Q9BZM4 244 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ALX4Q9H161 411 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 ASF1BQ9NVP2 202 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 A0A0D9SG52 128 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 C5orf52A6NGY3 159 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RFPL4AA6NLU0 287 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RFPL4AL1F8VTS6 287 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 UBE2CO00762 179 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RNH1P13489 461 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 CSRP1P21291 193 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 NPBWR1P48145 328 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 LUMP51884 338 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 SSBP1Q04837 148 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 HABP2Q14520 560 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 EMC4Q5J8M3 183 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RAB12Q6IQ22 244 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ZNF546Q86UE3 836 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 LRRC75AQ8NAA5 344 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 C16orf52Q8NHV5 167 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 DUSP19Q8WTR2 217 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 LIPHQ8WWY8 451 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 DVL3Q92997 716 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 MCHR2Q969V1 340 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 FAM3DQ96BQ1 224 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 INTS14Q96SY0 518 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 PFDN5Q99471 154 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 POTEKPQ9BYX7 375 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 SEBOXQ9HB31 216 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 MMP25Q9NPA2 562 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 DHCR7Q9UBM7 475 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 A0A0A6YYC8 382 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 FAM221BA6H8Z2 402 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ZNF729A6NN14 1252 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 HSPB2A8KAH6 182 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 I3L1I5 382 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 K7EQS6 105 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 TNFRSF10CO14798 259 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 PHYHO14832 338 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 SMAD9O15198 467 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 FOXS1O43638 330 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 EIF4E2O60573 245 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 PMS2P2O95744 297 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 TXNDC12O95881 172 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ITGA5P08648 1049 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 FBXO45P0C2W1 286 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 BDKRB2P30411 391 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 AGTR1P30556 359 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 CCKBRP32239 447 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 PPIAP62937 165 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 SRSF5Q13243 272 aaKnown RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 PEA15Q15121 130 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 RAB11BQ15907 218 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 HSPB2Q16082 182 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 C2orf76Q3KRA6 126 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ARHGAP40Q5TG30 622 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 NKAIN2Q5VXU1 208 aa7.86□□□□□ -1.15
VCL-207ENST00000624354 ATG4DQ86TL0 474 aaPredicted RBP7.86□□□□□ -1.15
VCL-207ENST00000624354 ZSCAN1Q8NBB4 408 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms