RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 FAM98BQ52LJ0 330 aaKnown RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 FAM209AQ5JX71 171 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 DNM1P34Q6PK57 102 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 ARL9Q6T311 187 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 TRPM8Q7Z2W7 1104 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 MEX3DQ86XN8 651 aaKnown RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 GLB1L2Q8IW92 636 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 ZNF786Q8N393 782 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 FANK1Q8TC84 345 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 C11orf40Q8WZ69 217 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 GPA33Q99795 319 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 OR52D1Q9H346 318 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 TMEM160Q9NX00 188 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 NKIRAS2Q9NYR9 191 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 TAS2R1Q9NYW7 299 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 EIF3KQ9UBQ5 218 aaKnown RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 REV1Q9UBZ9 1251 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 CGGBP1Q9UFW8 167 aaPredicted RBP10.69□□□□□ -0.7
LINC00963-217ENST00000624009 LYVE1Q9Y5Y7 322 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 V9GYQ6 96 aa10.69□□□□□ -0.7
LINC00963-217ENST00000624009 STAMBPO95630 424 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 IGHV3-13P01766 116 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 IGFBP1P08833 259 aaPredicted RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 DAOP14920 347 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 CTLA4P16410 223 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 ATP6V1B2P21281 511 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 APEX1P27695 318 aaKnown RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 NR4A2P43354 598 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 GDI2P50395 445 aaKnown RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 KLF3P57682 345 aaPredicted RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 AQP6Q13520 282 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 ENDOGQ14249 297 aaKnown RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 TMEM249Q2WGJ8 235 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 DNAL1Q4LDG9 190 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 ZNF770Q6IQ21 691 aaPredicted RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 UGT2A3Q6UWM9 527 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 ZNF620Q6ZNG0 422 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 PAQR4Q8N4S7 273 aaPredicted RBP10.68□□□□□ -0.7
LINC00963-217ENST00000624009 CLDN22Q8N7P3 220 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 SYNPRQ8TBG9 265 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 BCAS4Q8TDM0 211 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 GNPDA2Q8TDQ7 276 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 COG8Q96MW5 612 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 ZNF416Q9BWM5 594 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 RACGAP1Q9H0H5 632 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 WNT5BQ9H1J7 359 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 SYT4Q9H2B2 425 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 ELOVL3Q9HB03 270 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 IER3IP1Q9Y5U9 82 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 SVEP1Q4LDE5 3571 aa10.68□□□□□ -0.7
LINC00963-217ENST00000624009 TANC2Q9HCD6 1990 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 LOC100509620A0A075B734 347 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 A0A1W2PPL8 197 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 ARRDC5A6NEK1 342 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 AQP12BA6NM10 295 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 TNFRSF11BO00300 401 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 MT-ND5P03915 603 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 ADRA2AP08913 450 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 RAP2AP10114 183 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 LIPAP38571 399 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 GLO1Q04760 184 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 MBNL2Q5VZF2 373 aaKnown RBP10.67□□□□□ -0.7
LINC00963-217ENST00000624009 PGBD2Q6P3X8 592 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 CD300LDQ6UXZ3 194 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 CYP2R1Q6VVX0 501 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 RINLQ6ZS11 566 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 ZBTB46Q86UZ6 589 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 AQP12AQ8IXF9 295 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 OR4C15Q8NGM1 316 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 UBASH3BQ8TF42 649 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 SNX33Q8WV41 574 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 HTRA1Q92743 480 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 HPS1Q92902 700 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 RASD2Q96D21 266 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 TBCCD1Q9NVR7 557 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 IL20Q9NYY1 176 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 CDH10Q9Y6N8 788 aa10.67□□□□□ -0.7
LINC00963-217ENST00000624009 C5orf49A4QMS7 147 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 H7C1C5 153 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 ACOT8O14734 319 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 SLC16A7O60669 478 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 LCKP06239 509 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 ADH4P08319 380 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 TACSTD2P09758 323 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 FAM157BP0CG42 384 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 GSTM3P21266 225 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 ACHEP22303 614 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 CDKN2AP42771 156 aaKnown RBP10.66□□□□□ -0.7
LINC00963-217ENST00000624009 GZMKP49863 264 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 ARHGDIAP52565 204 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 LCN6P62502 163 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 MS4A2Q01362 244 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 RIN1Q13671 783 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 ZNF718Q3SXZ3 478 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 OR2T5Q6IEZ7 315 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 RASSF6Q6ZTQ3 369 aa10.66□□□□□ -0.7
LINC00963-217ENST00000624009 PTCHD4Q6ZW05 846 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms