RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ANXA2P07355 339 aaKnown RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 FTH1P19P0C7X4 201 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 FSTP19883 344 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 CLDN17P56750 224 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 CARD18P57730 90 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 OR10A3P58181 314 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 B3GALT5-AS1P59052 145 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 GABREP78334 506 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 MRPS10P82664 201 aaKnown RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 BAK1Q16611 211 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 OR7E24Q6IFN5 339 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 PRSS35Q8N3Z0 413 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 OR9K2Q8NGE7 335 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 HSD17B8Q92506 261 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 RGP1Q92546 391 aaPredicted RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 ITPKCQ96DU7 683 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 EMC6Q9BV81 110 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 NPAP1Q9NZP6 1156 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 LAMA1P25391 3075 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 TMEM269A0A1B0GVZ9 245 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 A0A1W2PPL8 197 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 LRRC3CA6NJW4 275 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 CDRT15L2A8MXV6 281 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 CTDSPLO15194 276 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 PIN1P1O15428 100 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 SULT1B1O43704 296 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 GPANK1O95872 356 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 QDPRP09417 244 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 ATF1P18846 271 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 GDF1P27539 372 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 CD96P40200 585 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 ZNF84P51523 738 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 GRB2P62993 217 aaKnown RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 CCBE1Q6UXH8 406 aaPredicted RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 ZNF227Q86WZ6 799 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 DTX1Q86Y01 620 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 OR6N1Q8NGY5 312 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 TMEM54Q969K7 222 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 SLAMF6Q96DU3 332 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 ZC3HAV1LQ96H79 300 aaKnown RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 AMELYQ99218 206 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 WACQ9BTA9 647 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 NELFAQ9H3P2 528 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 B3GAT2Q9NPZ5 323 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 OR52A1Q9UKL2 312 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 CAMK2AQ9UQM7 478 aa14.55□□□□□ -0.08
LDB3-208ENST00000623007 AK6Q9Y3D8 172 aaKnown RBP14.55□□□□□ -0.08
LDB3-208ENST00000623007 KLRC4-KLRK1H3BQV0 150 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 SRSF10O75494 262 aaKnown RBP14.54□□□□□ -0.08
LDB3-208ENST00000623007 HPNP05981 417 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 HNRNPCP07910 306 aaKnown RBP eCLIP14.54□□□□□ -0.08
LDB3-208ENST00000623007 TCEA1P23193 301 aaKnown RBP14.54□□□□□ -0.08
LDB3-208ENST00000623007 AZGP1P25311 298 aaKnown RBP14.54□□□□□ -0.08
LDB3-208ENST00000623007 RPS27P42677 84 aaKnown RBP14.54□□□□□ -0.08
LDB3-208ENST00000623007 KIR3DL2P43630 455 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 SLC25A35Q3KQZ1 300 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 BCL2L15Q5TBC7 163 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 LRRC69Q6ZNQ3 347 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 FOXL2NBQ6ZUU3 175 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 CCDC54Q8NEL0 328 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 IL17RDQ8NFM7 739 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 OR2M7Q8NG81 312 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 OR2V1Q8NHB1 315 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 FOXRED1Q96CU9 486 aaPredicted RBP14.54□□□□□ -0.08
LDB3-208ENST00000623007 ABCG5Q9H222 651 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 SEC61A2Q9H9S3 476 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 PARD6AQ9NPB6 346 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 CDV3Q9UKY7 258 aaKnown RBP14.54□□□□□ -0.08
LDB3-208ENST00000623007 TBC1D24Q9ULP9 559 aa14.54□□□□□ -0.08
LDB3-208ENST00000623007 A0A0J9YW62 118 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 A0A1W2PPK0 400 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 TRAPPC6AO75865 159 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 NEURL1O76050 574 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 POU3F2P20265 443 aaPredicted RBP14.53□□□□□ -0.08
LDB3-208ENST00000623007 HSD11B1P28845 292 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 MMP15P51511 669 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 C19orf57Q0VDD7 668 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 OR1C1Q15619 314 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 HYAL4Q2M3T9 481 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 GLT8D1Q68CQ7 371 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 GDPD3Q7L5L3 318 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.53□□□□□ -0.08
LDB3-208ENST00000623007 ZNF433Q8N7K0 673 aaPredicted RBP14.53□□□□□ -0.08
LDB3-208ENST00000623007 NKAIN3Q8N8D7 197 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 DEFB124Q8NES8 71 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 CHAC2Q8WUX2 184 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 HTRA1Q92743 480 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 RFT1Q96AA3 541 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 S100A16Q96FQ6 103 aaKnown RBP14.53□□□□□ -0.08
LDB3-208ENST00000623007 C7orf50Q9BRJ6 194 aaKnown RBP14.53□□□□□ -0.08
LDB3-208ENST00000623007 CCDC86Q9H6F5 360 aaKnown RBP14.53□□□□□ -0.08
LDB3-208ENST00000623007 POLE4Q9NR33 117 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 ANKRD10Q9NXR5 420 aa14.53□□□□□ -0.08
LDB3-208ENST00000623007 CENPXA8MT69 81 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 G3V3Y1 287 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 TNFSF11O14788 317 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 SLC43A1O75387 559 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 LIPCP11150 499 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 CD46P15529 392 aa14.52□□□□□ -0.08
LDB3-208ENST00000623007 MSR1P21757 451 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms