RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ARPC4-TTLL3A0A0A6YYG9 625 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 SULT2B1O00204 365 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 CD37P11049 281 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ST6GAL1P15907 406 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 UBE2IP63279 158 aaKnown RBP17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 PMPCAQ10713 525 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF761Q86XN6 746 aaPredicted RBP17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF107Q9UII5 783 aaPredicted RBP17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 FAM221BA6H8Z2 402 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 TMEM200CA6NKL6 621 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 LDLRAD4O15165 306 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 MTRF1O75570 445 aaKnown RBP17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 MAOAP21397 527 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ZBTB25P24278 435 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 CASRP41180 1078 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 CAPZA1P52907 286 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ADGRE4PQ86SQ3 457 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ASB17Q8WXJ9 295 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 KXD1Q9BQD3 176 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 GAREM1Q9H706 876 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 UBQLN4Q9NRR5 601 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 ATG2AQ2TAZ0 1938 aa17.62■□□□□ 0.41
PDLIM3-212ENST00000620787 C5orf67F2Z3F1 127 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 GPR31O00270 319 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 TNFRSF10CO14798 259 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 HLA-DQA2P01906 255 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 HLA-GP17693 338 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 FSTP19883 344 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 TACR3P29371 465 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 BDKRB2P30411 391 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 CORO6Q6QEF8 472 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 TMEM131Q92545 1883 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 MRPL22Q9NWU5 206 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 SLC39A1Q9NY26 324 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 NDRG3Q9UGV2 375 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 B9D1Q9UPM9 204 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 CPAMD8Q8IZJ3 1885 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 RAB19A4D1S5 217 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 OR14I1A6ND48 311 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF264O43296 627 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 CSN2P05814 226 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 HFEQ30201 348 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 LYG2Q86SG7 212 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 SLC25A42Q86VD7 318 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 PUSL1Q8N0Z8 303 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 OR4S1Q8NGB4 309 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 OR51A2Q8NGJ7 313 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 DNAJA3Q96EY1 480 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 CKLFQ9UBR5 152 aa17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 MRPS33Q9Y291 106 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-212ENST00000620787 A0A1W2PQF6 199 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 TMEM218A2RU14 115 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 TMEM235A6NFC5 223 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 DISC1C4P0D8 188 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 BGLAPP02818 100 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 HPGDP15428 266 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 NTSR1P30989 418 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 ROM1Q03395 351 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 NKPD1Q17RQ9 610 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 OR10K2Q6IF99 312 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 SLC18B1Q6NT16 456 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 C3orf33Q6P1S2 294 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 PAPD4Q6PIY7 484 aaKnown RBP17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 NUP54Q7Z3B4 507 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 CATSPERDQ86XM0 798 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 MRGPRFQ96AM1 343 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 C8orf44Q96CB5 159 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 TSNAXQ99598 290 aaKnown RBP17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 CMKLR1Q99788 373 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 MYEF2Q9P2K5 600 aaKnown RBP17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 C11orf98E9PRG8 122 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 SPARCP09486 303 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 ADCYAP1P18509 176 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 CENPAP49450 140 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 PPP1R1AQ13522 171 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 ELOCQ15369 112 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 PRTGQ2VWP7 1150 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 CCDC157Q569K6 752 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 PRAMEF17Q5VTA0 474 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF587Q96SQ5 575 aaPredicted RBP17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 GABRG3Q99928 467 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 CST11Q9H112 138 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 ASF1BQ9NVP2 202 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 SLC2A8Q9NY64 477 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 PLEKHA6Q9Y2H5 1048 aa17.6■□□□□ 0.41
PDLIM3-212ENST00000620787 A0A0A6YYH2 397 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 A6NJ64 397 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 SCDO00767 359 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 IL2RAP01589 272 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 CD2P06729 351 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 TNFRSF4P43489 277 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 INPP5JQ15735 1006 aaPredicted RBP17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 MDGA2Q7Z553 956 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 LDLRAD3Q86YD5 345 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 ZNF563Q8TA94 476 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 SLC25A44Q96H78 314 aaPredicted RBP17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 ADAM19Q9H013 955 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 FBXO9Q9UK97 447 aaPredicted RBP17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 CACNA1IQ9P0X4 2223 aa17.59■□□□□ 0.41
PDLIM3-212ENST00000620787 DCDC2BA2VCK2 349 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms