RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SOWAHCQ53LP3 525 aaPredicted RBP12.57□□□□□ -0.4
CIITA-213ENST00000618327 SYS1Q8N2H4 156 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 FAM109AQ8N4B1 249 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 ZNF321PQ8N8H1 164 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 SAP25Q8TEE9 199 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 PIGCQ92535 297 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 NINJ1Q92982 152 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 TAAR8Q969N4 342 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 SSX3Q99909 188 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 EMC7Q9NPA0 242 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 NDUFB11Q9NX14 153 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 CACNG2Q9Y698 323 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 ZNF814B7Z6K7 855 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 SHISA8B8ZZ34 492 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 F5H5P2 479 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 IL32P24001 234 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 ACER2Q5QJU3 275 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 ACBD4Q8NC06 268 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 OR5H6Q8NGV6 325 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 PRRX2Q99811 253 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 EXOSC3Q9NQT5 275 aaKnown RBP12.57□□□□□ -0.4
CIITA-213ENST00000618327 TMEM74BQ9NUR3 256 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 ZFC3H1O60293 1989 aaKnown RBP12.57□□□□□ -0.4
CIITA-213ENST00000618327 GOSR2O14653 212 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 GPX5O75715 221 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 TPOP07202 933 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 MSR1P21757 451 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 RPS27P42677 84 aaKnown RBP12.57□□□□□ -0.4
CIITA-213ENST00000618327 TATDN3Q17R31 274 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 PLCXD3Q63HM9 321 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 ZAR1Q86SH2 424 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 BEST4Q8NFU0 473 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 SMAP2Q8WU79 429 aaPredicted RBP12.57□□□□□ -0.4
CIITA-213ENST00000618327 KCNJ16Q9NPI9 418 aa12.57□□□□□ -0.4
CIITA-213ENST00000618327 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 A6NJ64 397 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 MVDP53602 400 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 BOLLQ8N9W6 283 aaKnown RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 OPALINQ96PE5 141 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 RNF167Q9H6Y7 350 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 ISYNA1Q9NPH2 558 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 ASH2LQ9UBL3 628 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 FZD7O75084 574 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 SERPINA5P05154 406 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CT45A8P0DMV1 189 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CT45A9P0DMV2 189 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 BDKRB2P30411 391 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 GRB2P62993 217 aaKnown RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 CT45A2Q5DJT8 189 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 MIB2Q96AX9 1013 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 GNRHR2Q96P88 292 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 TUBG2Q9NRH3 451 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 C4orf51C9J302 202 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 MAGEB4O15481 346 aaPredicted RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 SLC34A2O95436 690 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 SERPINA7P05543 415 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 DLX5P56178 289 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CLDN15P56746 228 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CD226Q15762 336 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CHPT1Q8WUD6 406 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CT55Q8WUE5 264 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CLDN23Q96B33 292 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 C12orf49Q9H741 205 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 PLEKHJ1Q9NW61 149 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 TCFL5Q9UL49 500 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 UBE2J1Q9Y385 318 aaPredicted RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 IMPA2O14732 288 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 AGPAT2O15120 278 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 ARPC1BO15143 372 aaKnown RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 RPS2P15880 293 aaKnown RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 SRMP19623 302 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 ATP1B3P54709 279 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 FXNQ16595 210 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 PRSS53Q2L4Q9 553 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 METAP1DQ6UB28 335 aaPredicted RBP12.56□□□□□ -0.4
CIITA-213ENST00000618327 RPS10P5Q9NQ39 176 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 HRH3Q9Y5N1 445 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
CIITA-213ENST00000618327 CACNA1EQ15878 2313 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 IGHV3-15A0A0B4J1V0 119 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 SULT1C2O00338 296 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 TNFSF11O14788 317 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 DIRAS3O95661 229 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 RAB3DO95716 219 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 SLC2A1P11166 492 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 LAP3P28838 519 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 OR1C1Q15619 314 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 UBE2NLQ5JXB2 153 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 CORO6Q6QEF8 472 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 MOB3CQ70IA8 216 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 PXKQ7Z7A4 578 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 LGALS14Q8TCE9 139 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 LOXL4Q96JB6 756 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 MAN2C1Q9NTJ4 1040 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 ZFP57Q9NU63 452 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 TTLL8A6PVC2 850 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 ABHD16AO95870 558 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 HTR2CP28335 458 aa12.55□□□□□ -0.4
CIITA-213ENST00000618327 NKX6-1P78426 367 aaPredicted RBP12.55□□□□□ -0.4
CIITA-213ENST00000618327 BDH1Q02338 343 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms