RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 TTC9Q92623 222 aa11.1□□□□□ -0.63
CIITA-212ENST00000618207 CACNG6Q9BXT2 260 aa11.1□□□□□ -0.63
CIITA-212ENST00000618207 RCE1Q9Y256 329 aa11.1□□□□□ -0.63
CIITA-212ENST00000618207 HS3ST3B1Q9Y662 390 aa11.1□□□□□ -0.63
CIITA-212ENST00000618207 DCDC2BA2VCK2 349 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 B8ZZF3 427 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 KLF7O75840 302 aaPredicted RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 CCL3P10147 92 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 MAPK3P27361 379 aaPredicted RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 HAAOP46952 286 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 P2RX3P56373 397 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 SIGLEC14Q08ET2 396 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 MRPL28Q13084 256 aaKnown RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 SNTB2Q13425 540 aaKnown RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 IL11RAQ14626 422 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 TMEM69Q5SWH9 247 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 KCTD18Q6PI47 426 aaPredicted RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 RPS4Y2Q8TD47 263 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 PHF21AQ96BD5 680 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 MARVELD1Q9BSK0 173 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 EMC7Q9NPA0 242 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 POLR1DQ9Y2S0 133 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 DOCK10Q96BY6 2186 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 EFNB2P52799 333 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 FAM198BQ6UWH4 519 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 ZNF600Q6ZNG1 722 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 LRRTM1Q86UE6 522 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 OR2M3Q8NG83 312 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 NPAP1Q9NZP6 1156 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 CGGBP1Q9UFW8 167 aaPredicted RBP11.09□□□□□ -0.63
CIITA-212ENST00000618207 CAMK2AQ9UQM7 478 aa11.09□□□□□ -0.63
CIITA-212ENST00000618207 TRBV5-5A0A0J9YX44 114 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 GMDSO60547 372 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 SLC2A1P11166 492 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 DAP3P51398 398 aaKnown RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 MMP15P51511 669 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 PITPNAQ00169 270 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 IFITM2Q01629 132 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 RASGEF1BQ0VAM2 473 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 TMEM255AQ5JRV8 349 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 ZNF468Q5VIY5 522 aaPredicted RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 DND1Q8IYX4 353 aaKnown RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 SLC26A10Q8NG04 563 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 OR51A2Q8NGJ7 313 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 OR52N5Q8NH56 324 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 ELP5Q8TE02 316 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 ADAMTS14Q8WXS8 1223 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 S100A16Q96FQ6 103 aaKnown RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 ZC3HAV1LQ96H79 300 aaKnown RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 ZCCHC4Q9H5U6 513 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 PPIEQ9UNP9 301 aaKnown RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 FLVCR2Q9UPI3 526 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 DHDHQ9UQ10 334 aa11.08□□□□□ -0.63
CIITA-212ENST00000618207 CHCHD2Q9Y6H1 151 aaPredicted RBP11.08□□□□□ -0.63
CIITA-212ENST00000618207 CNOT1A5YKK6 2376 aaKnown RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 DNAJC13O75165 2243 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 MYO7BQ6PIF6 2116 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 IGHV1-45A0A0A0MS14 117 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 A0A0A6YYJ9 748 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 TMEM269A0A1B0GVZ9 245 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 NTN3O00634 580 aaPredicted RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 KHDRBS3O75525 346 aaKnown RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 TCRBP04435 133 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 CD1AP06126 327 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 ITGA5P08648 1049 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 DUSP3P51452 185 aaPredicted RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 CLRN1P58418 232 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 SPOCK1Q08629 439 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 PLA1AQ53H76 456 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 RAET1LQ5VY80 246 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 B3GNTL1Q67FW5 361 aaPredicted RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 C3orf33Q6P1S2 294 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 OR10H5Q8NGA6 315 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 RNF128Q8TEB7 428 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 MRGPRX4Q96LA9 322 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 TAS2R4Q9NYW5 299 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 B3GAT1Q9P2W7 334 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 NSG1A0A0A6YYJ2 146 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 P2RY10O00398 339 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 GPR171O14626 319 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 PHYHO14832 338 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 KDM4BO94953 1096 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 LDOC1O95751 146 aaPredicted RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 COX6A1P12074 109 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 PRKXP51817 358 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 ART1P52961 327 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 OR10K2Q6IF99 312 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 UEVLDQ8IX04 471 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 OR11G2Q8NGC1 345 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 C11orf40Q8WZ69 217 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 SLC25A44Q96H78 314 aaPredicted RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 SLC26A1Q9H2B4 701 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 DPAGT1Q9H3H5 408 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 PTGES2Q9H7Z7 377 aa11.08□□□□□ -0.64
CIITA-212ENST00000618207 CDV3Q9UKY7 258 aaKnown RBP11.08□□□□□ -0.64
CIITA-212ENST00000618207 ASPMQ8IZT6 3477 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 SULT2B1O00204 365 aa11.07□□□□□ -0.64
CIITA-212ENST00000618207 H2BFMP0C1H6 154 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms