RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 UBCP0CG48 685 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ERGP11308 486 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 DDOSTP39656 456 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 CLDN6P56747 220 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 FGL1Q08830 312 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 RBMS2Q15434 407 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ARTNQ5T4W7 220 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 C1QL3Q5VWW1 255 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 PWWP2BQ6NUJ5 590 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 C12orf45Q8N5I9 185 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 CD300LFQ8TDQ1 290 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 RAB3CQ96E17 227 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 CDX2Q99626 313 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 BARHL1Q9BZE3 327 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MMP25Q9NPA2 562 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 PLEKHB1Q9UF11 243 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 B9D1Q9UPM9 204 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 WIF1Q9Y5W5 379 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ETFDHQ16134 617 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 EXT1Q16394 746 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ALKAL2Q6UX46 152 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 WDR88Q6ZMY6 472 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 PTPMT1Q8WUK0 201 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ZNF681Q96N22 645 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MNTQ99583 582 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MED18Q9BUE0 208 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MRI1Q9BV20 369 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 CCDC86Q9H6F5 360 aaKnown RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 NUP50Q9UKX7 468 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 BOKQ9UMX3 212 aaPredicted RBP8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 A3GALT2U3KPV4 340 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 MYOFQ9NZM1 2061 aa8.08□□□□□ -1.12
PDLIM5-222ENST00000615540 ANKUB1A6NFN9 424 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 AKR7A2O43488 359 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PSMB1P20618 241 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TAS2R20P59543 309 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 MDGA2Q7Z553 956 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 ANGPTL5Q86XS5 388 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 ISYNA1Q9NPH2 558 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 KLK11Q9UBX7 282 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PRRC2BQ5JSZ5 2229 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 A0A096LPE4 126 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TEX51A0A1B0GUA7 166 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 A0A1W2PPZ6 126 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 MRPS10P82664 201 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 STEAP1BQ6NZ63 245 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TMPRSS11FQ6ZWK6 438 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 OR6V1Q8N148 313 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 SLC43A2Q8N370 569 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 BHLHE23Q8NDY6 225 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 CADM4Q8NFZ8 388 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 HAVCR2Q8TDQ0 301 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 IL1F10Q8WWZ1 152 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PBOV1Q9GZY1 135 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TXNIPQ9H3M7 391 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 CDH20Q9HBT6 801 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PCDHB16Q9NRJ7 776 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 KCNIP3Q9Y2W7 256 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 NLRC5Q86WI3 1866 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 OIP5O43482 229 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TNFSF14O43557 240 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PRAF2O60831 178 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 APOC1P02654 83 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 WNT1P04628 370 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PVALBP20472 110 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 NPY4RP50391 375 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 DOC2BQ14184 412 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 SLC17A1Q14916 467 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 CDK10Q15131 360 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 C2orf76Q3KRA6 126 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 EMC4Q5J8M3 183 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 UNQ6126/PRO20091Q6UXV3 157 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TMEM59Q9BXS4 323 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 HRASLSQ9HDD0 168 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 LRP12Q9Y561 859 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 ETV7Q9Y603 341 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 FTCDNL1E5RQL4 147 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 AIPO00170 330 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 DCTDP32321 178 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PNLIPRP2P54317 469 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TPBGQ13641 420 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 FAM76BQ5HYJ3 339 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 LCN10Q6JVE6 187 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 C5orf46Q6UWT4 87 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TRMT61AQ96FX7 289 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 SGCZQ96LD1 299 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 PRRT1Q99946 306 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 NXT1Q9UKK6 140 aaKnown RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 NEUROG3Q9Y4Z2 214 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 EPXP11678 715 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 CYB561P49447 251 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 LAIR2Q6ISS4 152 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 CD300LDQ6UXZ3 194 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 SLC22A24Q8N4F4 322 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 TEX19Q8NA77 164 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 VRK1Q99986 396 aaPredicted RBP8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
PDLIM5-222ENST00000615540 ARGFXA6NJG6 315 aa8.06□□□□□ -1.12
PDLIM5-222ENST00000615540 IFITM5A6NNB3 132 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms