RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 DIRAS1O95057 198 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 HNF1AP20823 631 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 COL8A2P25067 703 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 GCH1P30793 250 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 SDHAP31040 664 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 WNT5AP41221 380 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 GYS2P54840 703 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 KRR1Q13601 381 aaKnown RBP21.56■■□□□ 1.04
VEGFA-227ENST00000615393 ENDOGQ14249 297 aaKnown RBP21.56■■□□□ 1.04
VEGFA-227ENST00000615393 TRIP10Q15642 601 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 ZNF718Q3SXZ3 478 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 OR52J3Q8NH60 311 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 MCUR1Q96AQ8 359 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 GPX7Q96SL4 187 aaPredicted RBP21.56■■□□□ 1.04
VEGFA-227ENST00000615393 ZNF416Q9BWM5 594 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 NDE1Q9NXR1 346 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 V9GYQ6 96 aa21.56■■□□□ 1.04
VEGFA-227ENST00000615393 TEX13CA0A0J9YWL9 993 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 NCR1O76036 304 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 IGHV3-13P01766 116 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 TMEM33P57088 247 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 C16orf89Q6UX73 402 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 PIGWQ7Z7B1 504 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 ZNF101Q8IZC7 436 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 NSMCE2Q96MF7 247 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 CDRT15Q96T59 188 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 SOX7Q9BT81 388 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 NRIP3Q9NQ35 241 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 NKIRAS2Q9NYR9 191 aa21.55■■□□□ 1.04
VEGFA-227ENST00000615393 NDRG4Q9ULP0 352 aaKnown RBP21.55■■□□□ 1.04
VEGFA-227ENST00000615393 RTTNQ86VV8 2226 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 UNC119BA6NIH7 251 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 IL2RGP31785 369 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 MAGEB1P43366 347 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 SEC23BQ15437 767 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 FAM120AOSQ5T036 256 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 ZNF774Q6NX45 483 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 ARL9Q6T311 187 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 CXXC5Q7LFL8 322 aaKnown RBP21.54■■□□□ 1.04
VEGFA-227ENST00000615393 LINC01356Q8N9X3 169 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 YIPF5Q969M3 257 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 RASD2Q96D21 266 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 ELOVL3Q9HB03 270 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 ZNF275Q9NSD4 429 aaPredicted RBP21.54■■□□□ 1.04
VEGFA-227ENST00000615393 ARL8BQ9NVJ2 186 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 CD300AQ9UGN4 299 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 CUBNO60494 3623 aa21.54■■□□□ 1.04
VEGFA-227ENST00000615393 ARPC2O15144 300 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 ICMTO60725 284 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 GADD45GO95257 159 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 SEMG1P04279 462 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 SRD5A1P18405 259 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 RPS6KA3P51812 740 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 ARHGDIAP52565 204 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 CCL8P80075 99 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 MXRA7P84157 204 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 SPIBQ01892 262 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 GLO1Q04760 184 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 SCRN3Q0VDG4 424 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 CCNIQ14094 377 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 SPATA46Q5T0L3 261 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 THSD4Q6ZMP0 1018 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 DPY19L2P2Q6ZN68 376 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 ADCK1Q86TW2 530 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 ABHD4Q8TB40 342 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 SLC25A40Q8TBP6 338 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 MARS2Q96GW9 593 aaKnown RBP21.53■■□□□ 1.04
VEGFA-227ENST00000615393 FUZQ9BT04 418 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 EMC7Q9NPA0 242 aa21.53■■□□□ 1.04
VEGFA-227ENST00000615393 H3BSA7 217 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 PPIHO43447 177 aaKnown RBP21.52■■□□□ 1.04
VEGFA-227ENST00000615393 KHDRBS3O75525 346 aaKnown RBP21.52■■□□□ 1.04
VEGFA-227ENST00000615393 SCG5P05408 212 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 COX5BP10606 129 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 CTLA4P16410 223 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 TEKQ02763 1124 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 SPATS1Q496A3 300 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 MBNL2Q5VZF2 373 aaKnown RBP21.52■■□□□ 1.04
VEGFA-227ENST00000615393 SMARCD3Q6STE5 483 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 RFPL4BQ6ZWI9 263 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 C1orf159Q96HA4 380 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 C4orf45Q96LM5 186 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 OR2J1Q9GZK6 312 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 SYT4Q9H2B2 425 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 DECR2Q9NUI1 292 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 VSX1Q9NZR4 365 aaPredicted RBP21.52■■□□□ 1.04
VEGFA-227ENST00000615393 IL20RAQ9UHF4 553 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 IER3IP1Q9Y5U9 82 aa21.52■■□□□ 1.04
VEGFA-227ENST00000615393 SOCS2O14508 198 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 TPD52L2O43399 206 aaKnown RBP21.51■■□□□ 1.03
VEGFA-227ENST00000615393 DOK2O60496 412 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 SLC16A7O60669 478 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 FABP3P05413 133 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 MSX2P35548 267 aaPredicted RBP21.51■■□□□ 1.03
VEGFA-227ENST00000615393 ZNF81P51508 661 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 CDH15P55291 814 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 PPP1CBP62140 327 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 GLB1L2Q8IW92 636 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 DEFB107AQ8IZN7 70 aa21.51■■□□□ 1.03
VEGFA-227ENST00000615393 KLF14Q8TD94 323 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms