RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 BIDP55957 195 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 GLO1Q04760 184 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 MOGAT2Q3SYC2 334 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 GLYATL3Q5SZD4 288 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 GPAT4Q86UL3 456 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 EID2Q8N6I1 236 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 SLC26A10Q8NG04 563 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 OR52N5Q8NH56 324 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 HGDQ93099 445 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 SLC25A44Q96H78 314 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 SOX7Q9BT81 388 aa12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 DPCDQ9BVM2 203 aaPredicted RBP12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 MRPL39Q9NYK5 338 aaKnown RBP12.6□□□□□ -0.39
PCDHGA3-202ENST00000612467 GGT3PA6NGU5 568 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 OR6C76A6NM76 312 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 PATE3B3GLJ2 98 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 MEN1O00255 615 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 VSIG10L2P0DP72 767 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF28P17035 718 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 SFTPDP35247 375 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF81P51508 661 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 TEX30Q5JUR7 227 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 PHF19Q5T6S3 580 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 CATSPERDQ86XM0 798 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 RAB40AQ8WXH6 277 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 CRB3Q9BUF7 120 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 PCED1AQ9H1Q7 454 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 COPZ2Q9P299 210 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 WNT16Q9UBV4 365 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ANKUB1A6NFN9 424 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 G3V3Y1 287 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ACOT7O00154 380 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ALX3O95076 343 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 HRGP04196 525 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 SLC2A1P11166 492 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 EPHA8P29322 1005 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 BLVRAP53004 296 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 HSF1Q00613 529 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 JAGN1Q8N5M9 183 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 POC1BQ8TC44 478 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 SPSB2Q99619 263 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 ZNF436Q9C0F3 470 aaPredicted RBP12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 CHST6Q9GZX3 395 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
PCDHGA3-202ENST00000612467 LOC107986453A0A1B0GWG9 222 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CIB4A0PJX0 185 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 XRCC3O43542 346 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 MPC2O95563 127 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 FOSL2P15408 326 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 ENPP1P22413 925 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 C17orf67Q0P5P2 114 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 RAB11BQ15907 218 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 NUP54Q7Z3B4 507 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 LUZP2Q86TE4 346 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 ZNF248Q8NDW4 579 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 OR13C3Q8NGS6 347 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 ST7LQ8TDW4 575 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 HEXA-AS1Q9H8Q6 139 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 PPP4R1LQ9P1A2 415 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 RPH3AQ9Y2J0 694 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 SIT1Q9Y3P8 196 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CENPBD1B2RD01 187 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CD3DP04234 171 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 RLN1P04808 185 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 ZNF823P16415 610 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 PTGDSP41222 190 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 MYBPHQ13203 477 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 RSPO4Q2I0M5 234 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 H1FNTQ75WM6 255 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 OR51S1Q8NGJ8 323 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 MAFAQ8NHW3 353 aaPredicted RBP12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 STK35Q8TDR2 534 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 OIT3Q8WWZ8 545 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 FAM46BQ96A09 425 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CMBLQ96DG6 245 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CMTM3Q96MX0 182 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 SPACA5Q96QH8 159 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 KCNK17Q96T54 332 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 CMKLR1Q99788 373 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 G6PC2Q9NQR9 355 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 RARRES3Q9UL19 164 aa12.58□□□□□ -0.4
PCDHGA3-202ENST00000612467 TMEM269A0A1B0GVZ9 245 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 OR2T1O43869 369 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 SRSF10O75494 262 aaKnown RBP12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 RAF1P04049 648 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 GTF2F2P13984 249 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 PER3P56645 1201 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 ROM1Q03395 351 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 HLA-BQ31612 363 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 ANKRD16Q6P6B7 361 aa12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 KCTD18Q6PI47 426 aaPredicted RBP12.57□□□□□ -0.4
PCDHGA3-202ENST00000612467 FAM198BQ6UWH4 519 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms