RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 TMEM53Q6P2H8 277 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 SLC25A47Q6Q0C1 308 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 SLC22A25Q6T423 547 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 CD300LDQ6UXZ3 194 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 ZNF627Q7L945 461 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 MDP1Q86V88 176 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 LRRC18Q8N456 261 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 SDR9C7Q8NEX9 313 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 CENPNQ96H22 339 aaPredicted RBP15.33■□□□□ 0.04
MUC1-224ENST00000611577 RADILQ96JH8 1075 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 SLC38A2Q96QD8 506 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 NMNAT3Q96T66 252 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 TEX12Q9BXU0 123 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 BEX2Q9BXY8 128 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 CCNB1IP1Q9NPC3 277 aa15.33■□□□□ 0.04
MUC1-224ENST00000611577 SVEP1Q4LDE5 3571 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 IGKV1D-43A0A0B4J1Z2 117 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 KHDRBS3O75525 346 aaKnown RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 IGFBP1P08833 259 aaPredicted RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 CBR1P16152 277 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 CRABP1P29762 137 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 CDKN2AP42771 156 aaKnown RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 IDH3GP51553 393 aaPredicted RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 DSCR9P59020 149 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 MRPS34P82930 218 aaKnown RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.32■□□□□ 0.04
MUC1-224ENST00000611577 KRTAP24-1Q3LI83 254 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 PTCHD4Q6ZW05 846 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 DPPA2Q7Z7J5 298 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 SKA3Q8IX90 412 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 OR10H5Q8NGA6 315 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 OR8D4Q8NGM9 314 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 NMD3Q96D46 503 aaKnown RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 SIAEQ9HAT2 523 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 RPRD1BQ9NQG5 326 aaKnown RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 PAPOLBQ9NRJ5 636 aaKnown RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 KRT84Q9NSB2 600 aa15.32■□□□□ 0.04
MUC1-224ENST00000611577 VSX1Q9NZR4 365 aaPredicted RBP15.32■□□□□ 0.04
MUC1-224ENST00000611577 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.31■□□□□ 0.04
MUC1-224ENST00000611577 PLCE1Q9P212 2302 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 SAC3D1A6NKF1 404 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 BHLHE40O14503 412 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 MGRN1O60291 552 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 IFNGP01579 166 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 CRYAAP02489 173 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 OSMP13725 252 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 RAB1AP62820 205 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 LOXL1Q08397 574 aaPredicted RBP15.31■□□□□ 0.04
MUC1-224ENST00000611577 SLC27A4Q6P1M0 643 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 SNX18Q96RF0 628 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 NUAK2Q9H093 628 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 SRA1Q9HD15 236 aaKnown RBP15.31■□□□□ 0.04
MUC1-224ENST00000611577 LPAR3Q9UBY5 353 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 KLHL21Q9UJP4 597 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 FBXL3Q9UKT7 428 aa15.31■□□□□ 0.04
MUC1-224ENST00000611577 IGHV1-18A0A0C4DH31 117 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 RIIAD1A6NNX1 92 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 PATE4P0C8F1 98 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 CTLA4P16410 223 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 ZNF16P17020 682 aaPredicted RBP15.3■□□□□ 0.04
MUC1-224ENST00000611577 MSR1P21757 451 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 TTKP33981 857 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 GIPRP48546 466 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 HSF2Q03933 536 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 PLP2Q04941 152 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 C11orf71Q6IPW1 123 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 LNX2Q8N448 690 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 ZNF525Q8N782 197 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 FAM169BQ8N8A8 192 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 OR4Q3Q8NH05 313 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 FOXN4Q96NZ1 517 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 PKP2Q99959 881 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 FN3KQ9H479 309 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 S100A14Q9HCY8 104 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 CBLN4Q9NTU7 201 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 TMEM160Q9NX00 188 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 REV1Q9UBZ9 1251 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 OAZ3Q9UMX2 235 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 COA3Q9Y2R0 106 aaPredicted RBP15.3■□□□□ 0.04
MUC1-224ENST00000611577 POLR1DQ9Y2S0 133 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 UGT2A1Q9Y4X1 527 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 ATP23Q9Y6H3 246 aa15.3■□□□□ 0.04
MUC1-224ENST00000611577 ZNF503-AS2A6NEH8 195 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 C12orf71A8MTZ7 269 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 ANKRD65E5RJM6 399 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 E7EQL1 145 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 H3BNX3 289 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 HAX1O00165 279 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 IGKV3-15P01624 115 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 HLA-DQA2P01906 255 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 CECR9P0C854 216 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 SLC25A16P16260 332 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 ZNF3P17036 446 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 LAP3P28838 519 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 GRK5P34947 590 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 SPOCK1Q08629 439 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 GINS1Q14691 196 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 RAB35Q15286 201 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 C3orf36Q3SXR2 165 aa15.29■□□□□ 0.04
MUC1-224ENST00000611577 FAHD1Q6P587 224 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms