RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 FAM209AQ5JX71 171 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 FAM205BPQ63HN1 556 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ZNF774Q6NX45 483 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ZNF730Q6ZMV8 503 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 CBLL1Q75N03 491 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 SYT9Q86SS6 491 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 OFCC1Q8IZS5 231 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 POU5F2Q8N7G0 328 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 RP9Q8TA86 221 aaKnown RBP6.47□□□□□ -1.37
CUX1-219ENST00000606749 ABHD4Q8TB40 342 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 IPCEF1Q8WWN9 437 aaPredicted RBP6.47□□□□□ -1.37
CUX1-219ENST00000606749 ACOT11Q8WXI4 607 aaPredicted RBP6.47□□□□□ -1.37
CUX1-219ENST00000606749 CCL17Q92583 94 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 RAB1CQ92928 201 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 RCN3Q96D15 328 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 C4orf45Q96LM5 186 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ZNF665Q9H7R5 613 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 SAP30LQ9HAJ7 183 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ELOVL3Q9HB03 270 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 G6PC2Q9NQR9 355 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 ZDHHC8Q9ULC8 765 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 WIPI2Q9Y4P8 454 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 CAPN7Q9Y6W3 813 aa6.47□□□□□ -1.37
CUX1-219ENST00000606749 A0A1W2PPL8 197 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ZSCAN5BA6NJL1 495 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 C12orf71A8MTZ7 269 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 H7C1C5 153 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 CXCR6O00574 342 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 CDC42EP2O14613 210 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 GSTA4O15217 222 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 AHCYL1O43865 530 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 PTP4A3O75365 173 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 UBOX5O94941 541 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 PRSS23O95084 383 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ZNF682O95780 498 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 IGHV2-5P01817 119 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ADH4P08319 380 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 CD14P08571 375 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 COX4I1P13073 169 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ZNF26P17031 533 aaPredicted RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 MSR1P21757 451 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 RPL4P36578 427 aaKnown RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 SLC9A3P48764 834 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ARHGDIAP52565 204 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 LCN6P62502 163 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 GUCY1A3Q02108 690 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 PSG7Q13046 419 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 SCGB2A2Q13296 93 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ZBED5Q49AG3 693 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 IFI44LQ53G44 452 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 SPRNQ5BIV9 151 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 C8orf82Q6P1X6 216 aaPredicted RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 SHQ1Q6PI26 577 aaKnown RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 ARL9Q6T311 187 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 THSD4Q6ZMP0 1018 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 RFPL4BQ6ZWI9 263 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 TMPRSS11FQ6ZWK6 438 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 MBOAT2Q6ZWT7 520 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 FKBP9P1Q75LS8 142 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 TSEN54Q7Z6J9 526 aaKnown RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 ARPINQ7Z6K5 226 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 FAM156AQ8NDB6 213 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 SEMA6DQ8NFY4 1073 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 OR13C2Q8NGS9 318 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ZFAND2BQ8WV99 257 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 GEMIN6Q8WXD5 167 aaKnown RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 RAB39BQ96DA2 213 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ELMOD3Q96FG2 381 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 TIMD4Q96H15 378 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 Q96M85 177 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 HOPXQ9BPY8 73 aaPredicted RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 WACQ9BTA9 647 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 TMPRSS13Q9BYE2 586 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 EGLN1Q9GZT9 426 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 CCDC134Q9H6E4 229 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 NMNAT1Q9HAN9 279 aaPredicted RBP6.46□□□□□ -1.38
CUX1-219ENST00000606749 MSL2Q9HCI7 577 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 POLE4Q9NR33 117 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 CYSLTR2Q9NS75 346 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 TBCCD1Q9NVR7 557 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 GRHPRQ9UBQ7 328 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 PCDHB10Q9UN67 800 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 ADAM18Q9Y3Q7 739 aa6.46□□□□□ -1.38
CUX1-219ENST00000606749 LOC105371242A0A075B767 164 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 A0A0G2JMP0 313 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 A0A0X1KG70 313 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 PRSS37A4D1T9 235 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 H3BSA7 217 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 J3QLI3 93 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 NME4O00746 187 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 SERPINA1P01009 418 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 CD55P08174 381 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 COX5BP10606 129 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 EPHA1P21709 976 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 TUBG1P23258 451 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 RBMXP38159 391 aaKnown RBP6.45□□□□□ -1.38
CUX1-219ENST00000606749 GPR4P46093 362 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 SLC7A2P52569 658 aa6.45□□□□□ -1.38
CUX1-219ENST00000606749 SLC3A1Q07837 685 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms