RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF14P17017 642 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CEACAM8P31997 349 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ARRB2P32121 409 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 DUSP3P51452 185 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ACLYP53396 1101 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC37A1P57057 533 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CD47Q08722 323 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 KIR3DS1Q14943 382 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ACKR1Q16570 336 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 DUOXA1Q1HG43 343 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF284Q2VY69 593 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 LAIR2Q6ISS4 152 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 HACD2Q6Y1H2 254 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 GRASPQ7Z6J2 395 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 TBC1D26Q86UD7 250 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC47A2Q86VL8 602 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF444Q8N0Y2 327 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 AQP11Q8NBQ7 271 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 NPEPL1Q8NDH3 523 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR5M9Q8NGP3 310 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2AJ1Q8NGZ0 328 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2G2Q8NGZ5 317 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2T11Q8NH01 316 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 NPRL2Q8WTW4 380 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MALSU1Q96EH3 234 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 LIN37Q96GY3 246 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MS4A4EQ96PG1 132 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PKMYT1Q99640 499 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SSBP4Q9BWG4 385 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 COMMD4Q9H0A8 199 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PORCNQ9H237 461 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 IL17RBQ9NRM6 502 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC25A13Q9UJS0 675 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 GNG8Q9UK08 70 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ZNF222Q9UK12 451 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MAST2Q6P0Q8 1798 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MEIKINA0A087WXM9 373 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 A0A1W2PPE3 182 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PRORSD1PA6NEY8 169 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 C5orf58C9J3I9 102 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 H7C417 338 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CLIC1O00299 241 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PTGESO14684 152 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 RAB29O14966 203 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PCDH7O60245 1069 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SOX15O60248 233 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CA11O75493 328 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 AGFG2O95081 481 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC35G4P0C7Q5 338 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 FGF3P11487 239 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MMP11P24347 488 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 IFNGR2P38484 337 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MAGEA5P43359 124 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ELLP55199 621 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 KLF3P57682 345 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ISL1P61371 349 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MRPS10P82664 201 aaKnown RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OGDHQ02218 1023 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 EMX2Q04743 252 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 UBXN2BQ14CS0 331 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ATP6V1FQ16864 119 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 APOBEC3HQ6NTF7 200 aaKnown RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CCDC144NLQ6NUI1 221 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CYP2R1Q6VVX0 501 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 LANCL3Q6ZV70 420 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 CPEB2Q7Z5Q1 589 aaKnown RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 ADGRF3Q8IZF5 1079 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 POC1AQ8NBT0 407 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PXT1Q8NFP0 134 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR11H7Q8NGC8 314 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR52I1Q8NGK6 324 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR10K1Q8NGX5 313 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 OR6K3Q8NGY3 331 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PRAP1Q96NZ9 151 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC22A12Q96S37 553 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 NKX3-1Q99801 234 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 NIPSNAP1Q9BPW8 284 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 RSG1Q9BU20 258 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 WWTR1Q9GZV5 400 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 TMEM38AQ9H6F2 299 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 UBE2TQ9NPD8 197 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 PIPOXQ9P0Z9 390 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 RCC2Q9P258 522 aaKnown RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC17A6Q9P2U8 582 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 DKKL1Q9UK85 242 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 EMCNQ9ULC0 261 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 SLC35A3Q9Y2D2 325 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 COA3Q9Y2R0 106 aaPredicted RBP4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 HCFC2Q9Y5Z7 792 aa4.5□□□□□ -1.69
SPTBN1-206ENST00000602898 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 PRAMEF33A0A0G2JMD5 474 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 EMC8O43402 210 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 XRCC3O43542 346 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 LDB2O43679 373 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 SRPX2O60687 465 aaPredicted RBP4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 PRAMEF10O60809 474 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 RP2O75695 350 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 RAD51DO75771 328 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 OR2J2O76002 312 aa4.49□□□□□ -1.69
SPTBN1-206ENST00000602898 SYNGR4O95473 234 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms