RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MRPS34P82930 218 aaKnown RBP15.89■□□□□ 0.13
VRK3-225ENST00000601912 LIPNQ5VXI9 398 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 ARL9Q6T311 187 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 ZNF100Q8IYN0 542 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 TEX19Q8NA77 164 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 WNT2BQ93097 391 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 AMELYQ99218 206 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 ELOVL3Q9HB03 270 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 SLCO1C1Q9NYB5 712 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 PTTG2Q9NZH5 202 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 GRIP1Q9Y3R0 1128 aa15.89■□□□□ 0.13
VRK3-225ENST00000601912 TRIM64BA6NI03 449 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 OGG1O15527 345 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 ZNHIT1O43257 154 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 RPP14O95059 124 aaKnown RBP15.88■□□□□ 0.13
VRK3-225ENST00000601912 HLA-DPB1P04440 258 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 EDNRAP25101 427 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 CRYBB2P43320 205 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 NCS1P62166 190 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 RPS25P62851 125 aaKnown RBP15.88■□□□□ 0.13
VRK3-225ENST00000601912 TRAM1Q15629 374 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 TSPO2Q5TGU0 170 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 DMKNQ6E0U4 476 aaPredicted RBP15.88■□□□□ 0.13
VRK3-225ENST00000601912 ZNF585AQ6P3V2 769 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 CORO6Q6QEF8 472 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 DEGS2Q6QHC5 323 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 LRRN1Q6UXK5 716 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 RPTNQ6XPR3 784 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 CISD2Q8N5K1 135 aaKnown RBP15.88■□□□□ 0.13
VRK3-225ENST00000601912 Q8NA96 180 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 ST7LQ8TDW4 575 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 COQ7Q99807 217 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 TMED9Q9BVK6 235 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 GPR35Q9HC97 309 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 UPB1Q9UBR1 384 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 ST6GALNAC2Q9UJ37 374 aa15.88■□□□□ 0.13
VRK3-225ENST00000601912 SF3B6Q9Y3B4 125 aaKnown RBP15.88■□□□□ 0.13
VRK3-225ENST00000601912 SIRT4Q9Y6E7 314 aaPredicted RBP15.88■□□□□ 0.13
VRK3-225ENST00000601912 TRBV2A0A0J9YWF9 115 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 ZNF254O75437 659 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 GPX5O75715 221 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 ABHD16AO95870 558 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 GABRA1P14867 456 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 AGTR1P30556 359 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 HOXD11P31277 338 aaPredicted RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 PSMB10P40306 273 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 RIDAP52758 137 aaKnown RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 ROR2Q01974 943 aaKnown RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 SLC3A1Q07837 685 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 NFATC3Q12968 1075 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 AQP6Q13520 282 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 CDK5R1Q15078 307 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 STK11Q15831 433 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 CEACAM16Q2WEN9 425 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 ACSF3Q4G176 576 aaPredicted RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 ZNF324BQ6AW86 544 aaPredicted RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 SPATC1Q76KD6 591 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 SMIM19Q96E16 107 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 TM9SF2Q99805 663 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 SIAEQ9HAT2 523 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 ASH2LQ9UBL3 628 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 GDF2Q9UK05 429 aaPredicted RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 LHFPL6Q9Y693 200 aa15.87■□□□□ 0.13
VRK3-225ENST00000601912 PHF3Q92576 2039 aaKnown RBP15.87■□□□□ 0.13
VRK3-225ENST00000601912 A0A1W2PPW3 197 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 ZNF587BE7ETH6 402 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 SS18L1O75177 396 aaPredicted RBP15.86■□□□□ 0.13
VRK3-225ENST00000601912 CD1AP06126 327 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 PTGER4P35408 488 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 SPCS2Q15005 226 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 FAM27BQ5VT28 67 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 OR2A2Q6IF42 318 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 ZNF544Q6NX49 715 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 NUFIP2Q7Z417 695 aaKnown RBP15.86■□□□□ 0.13
VRK3-225ENST00000601912 MS4A15Q8N5U1 240 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 KBTBD8Q8NFY9 601 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 RNF133Q8WVZ7 376 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 NABP1Q96AH0 204 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 ZNF837Q96EG3 531 aaPredicted RBP15.86■□□□□ 0.13
VRK3-225ENST00000601912 FOXB1Q99853 325 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 DCUN1D5Q9BTE7 237 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 CENPOQ9BU64 300 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 ZNF416Q9BWM5 594 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 SLC7A10Q9NS82 523 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 CENPMQ9NSP4 180 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 TMEM38BQ9NVV0 291 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 CACNA1CQ13936 2221 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 TRDV1A0A1B0GX56 115 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 CD8B2A6NJW9 211 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 WDR1O75083 606 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 IGHV3-9P01782 118 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 H2BFMP0C1H6 154 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 GALP22466 123 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 GDI2P50395 445 aaKnown RBP15.86■□□□□ 0.13
VRK3-225ENST00000601912 NSUN5P2Q63ZY6 315 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 CD200R1LQ6Q8B3 271 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 USP43Q70EL4 1123 aa15.86■□□□□ 0.13
VRK3-225ENST00000601912 RHOUQ7L0Q8 258 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms