RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MCEMP1Q8IX19 187 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 ZNF679Q8IYX0 411 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 GPR137CQ8N3F9 429 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 RBMXL3Q8N7X1 1067 aaKnown RBP12.14□□□□□ -0.47
IRF3-229ENST00000601373 YIPF7Q8N8F6 280 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 ZFP41Q8N8Y5 198 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 FOXN4Q96NZ1 517 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 CENPOQ9BU64 300 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 ABHD6Q9BV23 337 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 MROQ9BYG7 248 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 PRDM14Q9GZV8 571 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 DCSTAMPQ9H295 470 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 SEC61A2Q9H9S3 476 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 BCO1Q9HAY6 547 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 GP6Q9HCN6 339 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 TXNL4BQ9NX01 149 aaKnown RBP12.14□□□□□ -0.47
IRF3-229ENST00000601373 MRM2Q9UI43 246 aaKnown RBP12.14□□□□□ -0.47
IRF3-229ENST00000601373 IKZF2Q9UKS7 526 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 CAMK2AQ9UQM7 478 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 B3GNT3Q9Y2A9 372 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 KLHDC2Q9Y2U9 406 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 ZNF407Q9C0G0 2248 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 ATMQ13315 3056 aa12.14□□□□□ -0.47
IRF3-229ENST00000601373 PNMA8CA0A1B0GUJ8 204 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 E9PI62 339 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 MRPL33O75394 65 aaKnown RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 MPZL1O95297 269 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 ABHD16AO95870 558 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 FCGR2AP12318 317 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 CALRP27797 417 aaKnown RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 SERPINB10P48595 397 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 LSM6P62312 80 aaKnown RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 STK11Q15831 433 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 MEP1BQ16820 701 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 LIPNQ5VXI9 398 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 RHOUQ7L0Q8 258 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 KRT77Q7Z794 578 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 SIAH3Q8IW03 269 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 OR2AJ1Q8NGZ0 328 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 OR52N5Q8NH56 324 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 NDNFQ8TB73 568 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 DYNC2LI1Q8TCX1 351 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 ABHD3Q8WU67 409 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 TMEM203Q969S6 136 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 SMIM19Q96E16 107 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 KCTD7Q96MP8 289 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 TTTY10Q9BZA0 68 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 KCNN2Q9H2S1 579 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 C1orf198Q9H425 327 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 POLE4Q9NR33 117 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 ACOXLQ9NUZ1 547 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 CYB5R1Q9UHQ9 305 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 ST6GALNAC2Q9UJ37 374 aa12.13□□□□□ -0.47
IRF3-229ENST00000601373 ING1Q9UK53 422 aaPredicted RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 NOSIPQ9Y314 301 aaKnown RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 SIRT4Q9Y6E7 314 aaPredicted RBP12.13□□□□□ -0.47
IRF3-229ENST00000601373 TNRC6AQ8NDV7 1962 aaKnown RBP12.12□□□□□ -0.47
IRF3-229ENST00000601373 TRBV2A0A0J9YWF9 115 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 OR14I1A6ND48 311 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 MAGEB4O15481 346 aaPredicted RBP12.12□□□□□ -0.47
IRF3-229ENST00000601373 UPK3AO75631 287 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 RGS9O75916 674 aaPredicted RBP12.12□□□□□ -0.47
IRF3-229ENST00000601373 PDGFAP04085 211 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 YES1P07947 543 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 OR8G3PP0DMU2 310 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 NPR2P20594 1047 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 EDNRAP25101 427 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 RPS27P42677 84 aaKnown RBP12.12□□□□□ -0.47
IRF3-229ENST00000601373 RIDAP52758 137 aaKnown RBP12.12□□□□□ -0.47
IRF3-229ENST00000601373 SLC3A1Q07837 685 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 SF3B4Q15427 424 aaKnown RBP eCLIP12.12□□□□□ -0.474e-6■■■□□ 18.9
IRF3-229ENST00000601373 FDX2Q6P4F2 183 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 PAMR1Q6UXH9 720 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 LINC00299Q6ZSB3 139 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 FNDC9Q8TBE3 224 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 RPS4Y2Q8TD47 263 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 TM9SF2Q99805 663 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 TMED9Q9BVK6 235 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 RBM24Q9BX46 236 aaKnown RBP12.12□□□□□ -0.47
IRF3-229ENST00000601373 LINC00470Q9BZP3 86 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 NELFAQ9H3P2 528 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 ELOVL3Q9HB03 270 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 GLRX2Q9NS18 164 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 SLCO1C1Q9NYB5 712 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 UGT2A1Q9Y4X1 527 aa12.12□□□□□ -0.47
IRF3-229ENST00000601373 ARPC4-TTLL3A0A0A6YYG9 625 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 SLC22A20A6NK97 555 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 PRR32B1ATL7 298 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 GABRPO00591 440 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 MSR1P21757 451 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 PSMB10P40306 273 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 PEX19P40855 299 aa12.11□□□□□ -0.47
IRF3-229ENST00000601373 GDI2P50395 445 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms