RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	C1orf94	Q6P1W5	598 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	PGBD2	Q6P3X8	592 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	SYT9	Q86SS6	491 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	DHFR2	Q86XF0	187 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	BCL2L14	Q9BZR8	327 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	C1orf21	Q9H246	121 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	OR52D1	Q9H346	318 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	EMC7	Q9NPA0	242 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	REV1	Q9UBZ9	1251 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	DUSP13	Q9UII6	198 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	TMCC3	Q9ULS5	477 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	TIMM10B	Q9Y5J6	103 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	LYVE1	Q9Y5Y7	322 aa		13.28	□□□□□ -0.28
PLD3-223	ENST00000600948	C5orf49	A4QMS7	147 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	C12orf71	A8MTZ7	269 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	SLC16A7	O60669	478 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	KHDRBS3	O75525	346 aa	Known RBP	13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	KRT36	O76013	467 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	STAMBP	O95630	424 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	LCK	P06239	509 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	CCNO	P22674	350 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	SLC6A6	P31641	620 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	IFNGR2	P38484	337 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	GDI2	P50395	445 aa	Known RBP	13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	RFX4	Q33E94	735 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	ZNF774	Q6NX45	483 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	ALDH16A1	Q8IZ83	802 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	ZNF101	Q8IZC7	436 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	ZNF786	Q8N393	782 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	OR4C15	Q8NGM1	316 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	SYNPR	Q8TBG9	265 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	GNPDA2	Q8TDQ7	276 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	UBASH3B	Q8TF42	649 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	ERMAP	Q96PL5	475 aa	Predicted RBP	13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	WAC	Q9BTA9	647 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	MS4A5	Q9H3V2	200 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	MAGIX	Q9H6Y5	334 aa		13.27	□□□□□ -0.29
PLD3-223	ENST00000600948	COA3	Q9Y2R0	106 aa	Predicted RBP	13.27	□□□□□ -0.29
PLD3-223	ENST00000600948		A0A1W2PPW3	197 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	TNFRSF11B	O00300	401 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	ARPC3	O15145	178 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	TLX2	O43763	284 aa	Predicted RBP	13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	ICMT	O60725	284 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	GIF	P27352	417 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	KLF3	P57682	345 aa	Predicted RBP	13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	TSPAN31	Q12999	210 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	GGTLC2	Q14390	218 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	ZNF620	Q6ZNG0	422 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	TRPM8	Q7Z2W7	1104 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	ICA1L	Q8NDH6	482 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	OR9Q2	Q8NGE9	314 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	OR1J1	Q8NGS3	322 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	BCAS4	Q8TDM0	211 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	C11orf40	Q8WZ69	217 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	ASB9	Q96DX5	294 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	CLPTM1L	Q96KA5	538 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	SAMD8	Q96LT4	415 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	BTBD10	Q9BSF8	475 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	TRIM15	Q9C019	465 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	BPESC1	Q9GZL8	116 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	NUAK2	Q9H093	628 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	RERGL	Q9H628	205 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	VNN3	Q9NY84	501 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	TAAR3P	Q9P1P4	343 aa		13.26	□□□□□ -0.29
PLD3-223	ENST00000600948	IGHV4-61	A0A0C4DH41	118 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	LYNX1	G3V0Z9	82 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	DCTN6	O00399	190 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	MPZL1	O95297	269 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	IGHV4-31	P0DP07	118 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	LYNX1	P0DP58	116 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	COX5B	P10606	129 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	NAT2	P11245	290 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	SELENOV	P59797	346 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	LSM6	P62312	80 aa	Known RBP	13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	NKPD1	Q17RQ9	610 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	ALKBH6	Q3KRA9	238 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	ELFN2	Q5R3F8	820 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	C6orf52	Q5T4I8	152 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	OTP	Q5XKR4	325 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	RFPL4B	Q6ZWI9	263 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	GLB1L2	Q8IW92	636 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	CCDC124	Q96CT7	223 aa	Known RBP	13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	TSSK2	Q96PF2	358 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	SNX18	Q96RF0	628 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	IFT27	Q9BW83	186 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	YAE1D1	Q9NRH1	226 aa		13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	EIF3K	Q9UBQ5	218 aa	Known RBP	13.25	□□□□□ -0.29
PLD3-223	ENST00000600948	IGLV1-36	A0A0B4J1U3	117 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	ACOT8	O14734	319 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	CRLF1	O75462	422 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	NCR1	O76036	304 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	UBOX5	O94941	541 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	HPX	P02790	462 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	GAA	P10253	952 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	HIST1H1C	P16403	213 aa	Known RBP	13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	SCRN3	Q0VDG4	424 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	PPP1R8	Q12972	351 aa	Known RBP	13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	AQP6	Q13520	282 aa		13.24	□□□□□ -0.29
PLD3-223	ENST00000600948	RIN1	Q13671	783 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms