RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 TMEM255AQ5JRV8 349 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 CLEC12AQ5QGZ9 265 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 LEG1Q6P5S2 330 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 CD300LDQ6UXZ3 194 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 ASRGL1Q7L266 308 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 LRP11Q86VZ4 500 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 HS3ST5Q8IZT8 346 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 SVOPLQ8N434 492 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 C18orf12Q96KH6 178 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 FEVQ99581 238 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 SMR3AQ99954 134 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 C1orf198Q9H425 327 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 FN3KQ9H479 309 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 GSX1Q9H4S2 264 aaPredicted RBP13.55□□□□□ -0.24
RPS28-203ENST00000600659 CCNB1IP1Q9NPC3 277 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 REV1Q9UBZ9 1251 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
RPS28-203ENST00000600659 IDH3BO43837 385 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 STOMP27105 288 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 PPOXP50336 477 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 SNRPD2P62316 118 aaKnown RBP13.54□□□□□ -0.24
RPS28-203ENST00000600659 CBX1P83916 185 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 HSF2Q03933 536 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 RPL13AP3Q6NVV1 102 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 ZNF774Q6NX45 483 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 SYT9Q86SS6 491 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 ZBTB46Q86UZ6 589 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 ZNF101Q8IZC7 436 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 LNX2Q8N448 690 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 ZNRF4Q8WWF5 429 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 C11orf40Q8WZ69 217 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 RACGAP1Q9H0H5 632 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 BARX1Q9HBU1 254 aaPredicted RBP13.54□□□□□ -0.24
RPS28-203ENST00000600659 ARMC1Q9NVT9 282 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 ABCA1O95477 2261 aa13.54□□□□□ -0.24
RPS28-203ENST00000600659 NSD1Q96L73 2696 aaPredicted RBP13.53□□□□□ -0.24
RPS28-203ENST00000600659 IQCMA0A1B0GVH7 501 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 ICMTO60725 284 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 INHBBP09529 407 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 FAM157BP0CG42 384 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 HOXB6P17509 224 aaKnown RBP13.53□□□□□ -0.24
RPS28-203ENST00000600659 PCSK6P29122 969 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 RASSF2P50749 326 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 LSM6P62312 80 aaKnown RBP13.53□□□□□ -0.24
RPS28-203ENST00000600659 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.53□□□□□ -0.24
RPS28-203ENST00000600659 CCNIQ14094 377 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 MEP1BQ16820 701 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 TBC1D28Q2M2D7 210 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 SLC35F1Q5T1Q4 408 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 RFPL4BQ6ZWI9 263 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 GLB1L2Q8IW92 636 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 ZCCHC24Q8N2G6 241 aaKnown RBP13.53□□□□□ -0.24
RPS28-203ENST00000600659 SLC26A10Q8NG04 563 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 OR10H5Q8NGA6 315 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 OR52E2Q8NGJ4 325 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 GIPC3Q8TF64 312 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 WACQ9BTA9 647 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 TSSK6Q9BXA6 273 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 KCNN2Q9H2S1 579 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 MMADHCQ9H3L0 296 aaPredicted RBP13.53□□□□□ -0.24
RPS28-203ENST00000600659 CDH20Q9HBT6 801 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 RPRD1BQ9NQG5 326 aaKnown RBP13.53□□□□□ -0.24
RPS28-203ENST00000600659 FZR1Q9UM11 496 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 CMAHPQ9Y471 501 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 TIMM10BQ9Y5J6 103 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 LHFPL6Q9Y693 200 aa13.53□□□□□ -0.24
RPS28-203ENST00000600659 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.24
RPS28-203ENST00000600659 IGLV3-9A0A075B6K5 115 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 IGHV4-30-2A0A087WSY4 118 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 SYNGR3O43761 229 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 SSX4O60224 188 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 PTHP01270 115 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 TFP02787 698 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 PSKH1P11801 424 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 CRABP1P29762 137 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 APLNRP35414 380 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 EVX1P49640 407 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 EFNA4P52798 201 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 UCP2P55851 309 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 HIST1H3AP68431 136 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 GALK2Q01415 458 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 PLP2Q04941 152 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 KRTAP1-1Q07627 177 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 AQP6Q13520 282 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 RAB35Q15286 201 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 CCDC92Q53HC0 331 aaPredicted RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 HIST2H3PS2Q5TEC6 136 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 HIST2H3AQ71DI3 136 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 VASH1Q7L8A9 365 aaPredicted RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 JAZF1Q86VZ6 243 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 ZNF525Q8N782 197 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 CYB561A3Q8NBI2 242 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 SLC37A3Q8NCC5 494 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 OR52L1Q8NGH7 329 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 DUS3LQ96G46 650 aaKnown RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 SYT3Q9BQG1 590 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 BDH2Q9BUT1 245 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 RBM4Q9BWF3 364 aaKnown RBP13.52□□□□□ -0.25
RPS28-203ENST00000600659 NMNAT2Q9BZQ4 307 aa13.52□□□□□ -0.25
RPS28-203ENST00000600659 OR51B6Q9H340 312 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms