RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 CAPZA2P47755 286 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RPS6KA3P51812 740 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 EFNA4P52798 201 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 NPRL3Q12980 569 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 SNTB2Q13425 540 aaKnown RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RAB35Q15286 201 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 PCK2Q16822 640 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RSPO1Q2MKA7 263 aaPredicted RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RPL13AP3Q6NVV1 102 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 TMEM53Q6P2H8 277 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 UGT2A3Q6UWM9 527 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 ASRGL1Q7L266 308 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 GLB1L2Q8IW92 636 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 OR6V1Q8N148 313 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 UTP4Q969X6 686 aaKnown RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 POM121Q96HA1 1249 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 SAMD8Q96LT4 415 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 KCNS3Q9BQ31 491 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 RBM4Q9BWF3 364 aaKnown RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 MRPL37Q9BZE1 423 aaKnown RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 SYT4Q9H2B2 425 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 LRMDAQ9H2I8 198 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 MMADHCQ9H3L0 296 aaPredicted RBP7.55□□□□□ -1.2
SSBP4-208ENST00000600628 REV1Q9UBZ9 1251 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 ATPIF1Q9UII2 106 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 TMCC3Q9ULS5 477 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 AURKCQ9UQB9 309 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 CDH10Q9Y6N8 788 aa7.55□□□□□ -1.2
SSBP4-208ENST00000600628 TANC2Q9HCD6 1990 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 RNF223E7ERA6 249 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 H3BSA7 217 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 SOCS2O14508 198 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 XKRYO14609 159 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 SSX4O60224 188 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 ATP5HO75947 161 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 IGHV3-13P01766 116 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 TFP02787 698 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 STOMP27105 288 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 GIFP27352 417 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 APEX1P27695 318 aaKnown RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 UCP2P55851 309 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 DSCR9P59020 149 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 PCBD1P61457 104 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 COX10Q12887 443 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 PPP1R8Q12972 351 aaKnown RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 KRT80Q6KB66 452 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 LRP11Q86VZ4 500 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 C1orf174Q8IYL3 243 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 ZNF101Q8IZC7 436 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 LRRC18Q8N456 261 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 SLC26A10Q8NG04 563 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 FANK1Q8TC84 345 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 C10orf105Q8TEF2 133 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 NSMAFQ92636 917 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 MARS2Q96GW9 593 aaKnown RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 TSSK2Q96PF2 358 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 ERMAPQ96PL5 475 aaPredicted RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 NMNAT3Q96T66 252 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 FEVQ99581 238 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 REG4Q9BYZ8 158 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 BCL2L14Q9BZR8 327 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 NDEL1Q9GZM8 345 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 EGLN3Q9H6Z9 239 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 MYEF2Q9P2K5 600 aaKnown RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 KLHL21Q9UJP4 597 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 B9D1Q9UPM9 204 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 COA3Q9Y2R0 106 aaPredicted RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 SAMHD1Q9Y3Z3 626 aaKnown RBP7.54□□□□□ -1.2
SSBP4-208ENST00000600628 CMAHPQ9Y471 501 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 TIMM10BQ9Y5J6 103 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 FKBP7Q9Y680 259 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 LHFPL6Q9Y693 200 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 PMF1-BGLAPU3KQ54 211 aa7.54□□□□□ -1.2
SSBP4-208ENST00000600628 IGHV4-30-2A0A087WSY4 118 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 A0A1B0GWJ7 208 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 VSTM5A8MXK1 200 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 SLC16A7O60669 478 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 KHDRBS3O75525 346 aaKnown RBP7.53□□□□□ -1.2
SSBP4-208ENST00000600628 CCNB2O95067 398 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 MPZL1O95297 269 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 PPP1R3DO95685 299 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 ADH4P08319 380 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 CCL2P13500 99 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 GSTM3P21266 225 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 CRABP1P29762 137 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 GGT2P36268 569 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 NUDT6P53370 316 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 RPS23P62266 143 aaKnown RBP7.53□□□□□ -1.2
SSBP4-208ENST00000600628 SNRPD2P62316 118 aaKnown RBP7.53□□□□□ -1.2
SSBP4-208ENST00000600628 CBX1P83916 185 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 HSF2Q03933 536 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 DBPQ10586 325 aaPredicted RBP7.53□□□□□ -1.2
SSBP4-208ENST00000600628 AQP6Q13520 282 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 FLOT2Q14254 428 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 SGCAQ16586 387 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 KRTAP21-3Q3LHN1 58 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 CCDC92Q53HC0 331 aaPredicted RBP7.53□□□□□ -1.2
SSBP4-208ENST00000600628 MBNL2Q5VZF2 373 aaKnown RBP7.53□□□□□ -1.2
SSBP4-208ENST00000600628 VHLLQ6RSH7 139 aa7.53□□□□□ -1.2
SSBP4-208ENST00000600628 COLCA1Q6ZS62 124 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms