RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GUCA1AP43080 201 aaPredicted RBP17.89■□□□□ 0.45
PNKP-212ENST00000599454 CRYBA2P53672 197 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 ERVK-25P63136 954 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 FMODQ06828 376 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 ARMCX4Q5H9R4 360 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 MTX3Q5HYI7 312 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 MOSPD2Q8NHP6 518 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 C22orf15Q8WYQ4 148 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 RBP7Q96R05 134 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 WNT5BQ9H1J7 359 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 RIMS3Q9UJD0 308 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 PURGQ9UJV8 347 aaKnown RBP17.89■□□□□ 0.45
PNKP-212ENST00000599454 NUP50Q9UKX7 468 aa17.89■□□□□ 0.45
PNKP-212ENST00000599454 IGKV1D-43A0A0B4J1Z2 117 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 IGHV2-70P01814 119 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 IGHMP01871 453 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 TUBG1P23258 451 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 PRTN3P24158 256 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 ZFP36P26651 326 aaKnown RBP17.88■□□□□ 0.45
PNKP-212ENST00000599454 GZMMP51124 257 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 TNFAIP6P98066 277 aaPredicted RBP17.88■□□□□ 0.45
PNKP-212ENST00000599454 TMEM155Q4W5P6 130 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 FAM205BPQ63HN1 556 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 ZNF771Q7L3S4 317 aaPredicted RBP17.88■□□□□ 0.45
PNKP-212ENST00000599454 SIGLECL1Q8N7X8 197 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 DEFB108BQ8NET1 73 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 GEMIN6Q8WXD5 167 aaKnown RBP17.88■□□□□ 0.45
PNKP-212ENST00000599454 LRRC58Q96CX6 371 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 WACQ9BTA9 647 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 TUBG2Q9NRH3 451 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 PLEK2Q9NYT0 353 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 HIF3AQ9Y2N7 669 aa17.88■□□□□ 0.45
PNKP-212ENST00000599454 TIMM8AO60220 97 aaPredicted RBP17.87■□□□□ 0.45
PNKP-212ENST00000599454 TNFRSF1AP19438 455 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 TNFSF4P23510 183 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 LAP3P28838 519 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 CDK5R2Q13319 367 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 ALG10Q5BKT4 473 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 BEND6Q5SZJ8 279 aaPredicted RBP17.87■□□□□ 0.45
PNKP-212ENST00000599454 FOXL2NBQ6ZUU3 175 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 SYT9Q86SS6 491 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 KLHL36Q8N4N3 616 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 NPEPL1Q8NDH3 523 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 DYDC1Q8WWB3 177 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 C4orf45Q96LM5 186 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 SH3GL1Q99961 368 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 PATZ1Q9HBE1 687 aaKnown RBP17.87■□□□□ 0.45
PNKP-212ENST00000599454 MSL2Q9HCI7 577 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 TMEM106BQ9NUM4 274 aa17.87■□□□□ 0.45
PNKP-212ENST00000599454 NDRG4Q9ULP0 352 aaKnown RBP17.87■□□□□ 0.45
PNKP-212ENST00000599454 KCNAB3O43448 404 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 NGFP01138 241 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 IFNA14P01570 189 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 SBK2P0C263 348 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 ZNF12P17014 697 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 GSTM3P21266 225 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 RPL27P61353 136 aaKnown RBP17.86■□□□□ 0.45
PNKP-212ENST00000599454 ZNF154Q13106 437 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 PIN1Q13526 163 aaPredicted RBP17.86■□□□□ 0.45
PNKP-212ENST00000599454 CYLC2Q14093 348 aaPredicted RBP17.86■□□□□ 0.45
PNKP-212ENST00000599454 LAPTM4AQ15012 233 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 ZNF283Q8N7M2 679 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 SAMD8Q96LT4 415 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 MRI1Q9BV20 369 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 NPHS2Q9NP85 383 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 MMP26Q9NRE1 261 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 AUP1Q9Y679 476 aa17.86■□□□□ 0.45
PNKP-212ENST00000599454 C12orf71A8MTZ7 269 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 A8MXK9 166 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 COX5BP10606 129 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 MSR1P21757 451 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 PSG7Q13046 419 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 TOP3AQ13472 1001 aaPredicted RBP17.85■□□□□ 0.45
PNKP-212ENST00000599454 SPRNQ5BIV9 151 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 ZNF774Q6NX45 483 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 DCLRE1CQ96SD1 692 aaKnown RBP17.85■□□□□ 0.45
PNKP-212ENST00000599454 MAN2C1Q9NTJ4 1040 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 TBCCD1Q9NVR7 557 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 ZNF69Q9UC07 566 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 INSIG2Q9Y5U4 225 aa17.85■□□□□ 0.45
PNKP-212ENST00000599454 DNAJC9-AS1A6NH13 148 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 A6NIZ1 184 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 ABHD16AO95870 558 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 CPT2P23786 658 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 SLC6A9P48067 706 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 RAP1BP61224 184 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 RAP1AP62834 184 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 NANOGP8Q6NSW7 305 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 ERICH5Q6P6B1 374 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 LRRC28Q86X40 367 aaPredicted RBP17.84■□□□□ 0.45
PNKP-212ENST00000599454 EGFL7Q9UHF1 273 aa17.84■□□□□ 0.45
PNKP-212ENST00000599454 TRAPPC2LH3BP13 241 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 CLDN34H7C241 214 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 SURF4O15260 269 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 TNFRSF1BP20333 461 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 KITLGP21583 273 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 IFNA8P32881 189 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 BTG1P62324 171 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 ST3GAL3Q11203 375 aa17.83■□□□□ 0.44
PNKP-212ENST00000599454 ENDOGQ14249 297 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms