RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 NDUFAF4Q9P032 175 aa8.93□□□□□ -0.98
LIG1-213ENST00000596672 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
LIG1-213ENST00000596672 MGAM2Q2M2H8 2515 aa8.93□□□□□ -0.98
LIG1-213ENST00000596672 SLC22A23A1A5C7 686 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 ZSCAN5BA6NJL1 495 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 C17orf100A8MU93 164 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 EFCAB9A8MZ26 197 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 CDC14BO60729 498 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 KRT36O76013 467 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 IFNA14P01570 189 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 SEMG1P04279 462 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 CTLA4P16410 223 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 ANOS1P23352 680 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 OMPP47874 163 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 DAP3P51398 398 aaKnown RBP8.92□□□□□ -0.98
LIG1-213ENST00000596672 MMP15P51511 669 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 ACTR3P61158 418 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 CCL8P80075 99 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 CD47Q08722 323 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 TRAM2Q15035 370 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 IFI44LQ53G44 452 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 THEM4Q5T1C6 240 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 RGS7BPQ6MZT1 257 aaPredicted RBP8.92□□□□□ -0.98
LIG1-213ENST00000596672 TMEM53Q6P2H8 277 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 PTCHD4Q6ZW05 846 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 TMPRSS11FQ6ZWK6 438 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 MBOAT2Q6ZWT7 520 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 SLC25A40Q8TBP6 338 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 ACOT11Q8WXI4 607 aaPredicted RBP8.92□□□□□ -0.98
LIG1-213ENST00000596672 SLC7A6Q92536 515 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 RDH5Q92781 318 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 RASD2Q96D21 266 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 ALG12Q9BV10 488 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 SHARPINQ9H0F6 387 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 SMURF2Q9HAU4 748 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 CDH20Q9HBT6 801 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 IL20RAQ9UHF4 553 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 KLHL21Q9UJP4 597 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 ENPP4Q9Y6X5 453 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 PKD1L1Q8TDX9 2849 aa8.92□□□□□ -0.98
LIG1-213ENST00000596672 A0A1W2PPW3 197 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 C5orf49A4QMS7 147 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 DCTN6O00399 190 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 ACOT8O14734 319 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 DEAF1O75398 565 aaPredicted RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 IGHV3-13P01766 116 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 IFNW1P05000 195 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 LCKP06239 509 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 STOMP27105 288 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 SLC9A3P48764 834 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 ZNF84P51523 738 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 CHN2P52757 468 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 GALK2Q01415 458 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 FLOT2Q14254 428 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 TRIM25Q14258 630 aaKnown RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 RSPO1Q2MKA7 263 aaPredicted RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 SLC36A2Q495M3 483 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 AVPI1Q5T686 147 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 ARPINQ7Z6K5 226 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 OAFQ86UD1 273 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 LINC01356Q8N9X3 169 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 OR1J1Q8NGS3 322 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 SYNPRQ8TBG9 265 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 IPCEF1Q8WWN9 437 aaPredicted RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 GEMIN6Q8WXD5 167 aaKnown RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 STMN2Q93045 179 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 FAM46AQ96IP4 442 aaKnown RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 DHRS1Q96LJ7 313 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 MYCBPQ99417 103 aaPredicted RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 KCTD14Q9BQ13 255 aaPredicted RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 FNDC11Q9BVV2 318 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 OR2J1Q9GZK6 312 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 MS4A5Q9H3V2 200 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 LPAR2Q9HBW0 351 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 HINT3Q9NQE9 182 aaKnown RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 POLE4Q9NR33 117 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 NKX1-2Q9UD57 310 aaPredicted RBP8.91□□□□□ -0.98
LIG1-213ENST00000596672 KCNS2Q9ULS6 477 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 SIGLEC7Q9Y286 467 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 SPEF1Q9Y4P9 236 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 DOCK11Q5JSL3 2073 aa8.91□□□□□ -0.98
LIG1-213ENST00000596672 VSTM5A8MXK1 200 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 ICMTO60725 284 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 FARS2O95363 451 aaKnown RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 IGHV1-46P01743 117 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 CD14P08571 375 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 CST2P09228 141 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 SAGP10523 405 aaPredicted RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 HSD17B1P14061 328 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 SRD5A1P18405 259 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 ACHEP22303 614 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 CCNOP22674 350 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 CDKN2AP42771 156 aaKnown RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 GPR6P46095 362 aaPredicted RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 KLF3P57682 345 aaPredicted RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 TRAP1Q12931 704 aaKnown RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 TSTQ16762 297 aaKnown RBP8.9□□□□□ -0.98
LIG1-213ENST00000596672 TBC1D28Q2M2D7 210 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 ZBED5Q49AG3 693 aa8.9□□□□□ -0.98
LIG1-213ENST00000596672 CYP2R1Q6VVX0 501 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms