RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 CDC20BQ86Y33 519 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 UBE2J2Q8N2K1 259 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 C9orf106Q8NAJ2 232 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC26A10Q8NG04 563 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 OR52N1Q8NH53 320 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 SNX33Q8WV41 574 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 SPRYD4Q8WW59 207 aaPredicted RBP11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 GATAD2BQ8WXI9 593 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 MUL1Q969V5 352 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 TMIGD2Q96BF3 282 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 C12orf49Q9H741 205 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 CRLF2Q9HC73 371 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 GPR35Q9HC97 309 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 NDUFA13Q9P0J0 144 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 SPG11Q96JI7 2443 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 CCDC168Q8NDH2 2452 aa11.52□□□□□ -0.57
SHKBP1-209ENST00000595803 ALPK2Q86TB3 2170 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 DPPA5A6NC42 116 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 J3QLW9 94 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 IL2RAP01589 272 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 IGHV3-9P01782 118 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 MT-ND5P03915 603 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 TACSTD2P09758 323 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 GAAP10253 952 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF19P17023 458 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ALOX5APP20292 161 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 NPR2P20594 1047 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 TTKP33981 857 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 WNT4P56705 351 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 SIRPAP78324 504 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ROR2Q01974 943 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 EIF2B1Q14232 305 aaKnown RBP11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 RAB39AQ14964 217 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 MEP1BQ16820 701 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 TIGD6Q17RP2 521 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 TEX30Q5JUR7 227 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 SYT6Q5T7P8 510 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 OTPQ5XKR4 325 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC18B1Q6NT16 456 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF322Q6U7Q0 402 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 PLEKHG7Q6ZR37 379 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 FAM214BQ7L5A3 538 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 DPY19L4Q7Z388 723 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ABHD12BQ7Z5M8 362 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 SATL1Q86VE3 508 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 OR2AJ1Q8NGZ0 328 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ASB17Q8WXJ9 295 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 COG8Q96MW5 612 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 OR5M11Q96RB7 305 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 MGLLQ99685 303 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF649Q9BS31 505 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 TP63Q9H3D4 680 aaPredicted RBP11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 POLE4Q9NR33 117 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC7A10Q9NS82 523 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 KCNG2Q9UJ96 466 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 COPS3Q9UNS2 423 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 POLR1DQ9Y2S0 133 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 UGT2A1Q9Y4X1 527 aa11.51□□□□□ -0.57
SHKBP1-209ENST00000595803 MBD3L4A6NDZ8 208 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 MBD3L3A6NE82 208 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 A6NHS1 94 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 MBD3L5A6NJ08 208 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF587BE7ETH6 402 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 SCG5P05408 212 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 MSR1P21757 451 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 CAPZA2P47755 286 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 OR3A2P47893 321 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 GBX2P52951 348 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 LSM6P62312 80 aaKnown RBP11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 ACTA2P62736 377 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 ACTG2P63267 376 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 STK11Q15831 433 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 CEACAM16Q2WEN9 425 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 ARMCX4Q5H9R4 360 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 RTL6Q6ICC9 239 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 FOXL2NBQ6ZUU3 175 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 KCTD20Q7Z5Y7 419 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 DOLPP1Q86YN1 238 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 GCNT2Q8N0V5 402 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 CNEP1R1Q8N9A8 125 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 OTOSQ8NHW6 89 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 MBD3L2Q8NHZ7 208 aaPredicted RBP11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 TTYH2Q9BSA4 534 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 KCNN2Q9H2S1 579 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 EMC7Q9NPA0 242 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 ISYNA1Q9NPH2 558 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 BABAM2Q9NXR7 383 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 ZNF835Q9Y2P0 537 aa11.5□□□□□ -0.57
SHKBP1-209ENST00000595803 METTL15A6NJ78 407 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 RPL36A-HNRNPH2H7BZ11 118 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 SLC19A2O60779 497 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 SEC14L2O76054 403 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 KRT8P05787 483 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 CRHP06850 196 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 TMIGD3P0DMS9 266 aaPredicted RBP11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 TIMP3P35625 211 aa11.49□□□□□ -0.57
SHKBP1-209ENST00000595803 CD79BP40259 229 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms