RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CHID1Q9BWS9 393 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 NUAK2Q9H093 628 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 C1orf198Q9H425 327 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 CCNB1IP1Q9NPC3 277 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC7A8Q9UHI5 535 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 COA3Q9Y2R0 106 aaPredicted RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 SAMHD1Q9Y3Z3 626 aaKnown RBP9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 CDH10Q9Y6N8 788 aa9.45□□□□□ -0.9
SHKBP1-206ENST00000595523 MXRA5Q9NR99 2828 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 IGLV1-36A0A0B4J1U3 117 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 IQCMA0A1B0GVH7 501 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 BHLHE40O14503 412 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 LY6G6DO95868 133 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 F12P00748 615 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 GAAP10253 952 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 BMP4P12644 408 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 STOMP27105 288 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 WNT5AP41221 380 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 ERFP50548 548 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 GALK2Q01415 458 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 HSF2Q03933 536 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 PLP2Q04941 152 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 MICAQ29983 383 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 TBC1D28Q2M2D7 210 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 TMEM255AQ5JRV8 349 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 CLEC12AQ5QGZ9 265 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 RASSF6Q6ZTQ3 369 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 Q71RC1 249 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 ZNF101Q8IZC7 436 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 OR6V1Q8N148 313 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 LINC00471Q8N535 108 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 OR4K13Q8NH42 304 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 SLCO4A1Q96BD0 722 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 DDOQ99489 341 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 VRK1Q99986 396 aaPredicted RBP9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 SYT3Q9BQG1 590 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 DGCR6LQ9BY27 220 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 REG4Q9BYZ8 158 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 KCNN2Q9H2S1 579 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 OR51B6Q9H340 312 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 FN3KQ9H479 309 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 RERGLQ9H628 205 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 REEP1Q9H902 201 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 CDH20Q9HBT6 801 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 IL20Q9NYY1 176 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 FZR1Q9UM11 496 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 CMAHPQ9Y471 501 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 SPEF1Q9Y4P9 236 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 TIMM10BQ9Y5J6 103 aa9.44□□□□□ -0.9
SHKBP1-206ENST00000595523 C5orf49A4QMS7 147 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 OR6C68A6NDL8 312 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 C12orf71A8MTZ7 269 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 IDH3BO43837 385 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 ICMTO60725 284 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 KHDRBS3O75525 346 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 SOX14O95416 240 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 CST1P01037 141 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 PTHP01270 115 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 PCSK6P29122 969 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 APLNRP35414 380 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 EVX1P49640 407 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 UCP2P55851 309 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 RPS23P62266 143 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 KCNMB1Q16558 191 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 MEP1BQ16820 701 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 ZNF362Q5T0B9 420 aaPredicted RBP9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 SLC35F1Q5T1Q4 408 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 LEG1Q6P5S2 330 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 SYT9Q86SS6 491 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 SPATA24Q86W54 205 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 GLB1L2Q8IW92 636 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 PAPD5Q8NDF8 572 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 NPEPL1Q8NDH3 523 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 SDR9C7Q8NEX9 313 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 OR1J2Q8NGS2 313 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 OR4Q3Q8NH05 313 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 C10orf105Q8TEF2 133 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 C11orf40Q8WZ69 217 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 SNX18Q96RF0 628 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 NIPSNAP1Q9BPW8 284 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 RPRD1BQ9NQG5 326 aaKnown RBP9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 B9D1Q9UPM9 204 aa9.43□□□□□ -0.9
SHKBP1-206ENST00000595523 IGLV3-9A0A075B6K5 115 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 VWC2LB2RUY7 222 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 FKBP6O75344 327 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 STAMBPO95630 424 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CLPTM1O96005 669 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 TFP02787 698 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 HEXAP06865 529 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ADRA2AP08913 450 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ZNF250P15622 560 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CCNOP22674 350 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 CRABP1P29762 137 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 GUCA1AP43080 201 aaPredicted RBP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 ALDH3B1P43353 468 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 PCBD1P61457 104 aa9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 LSM6P62312 80 aaKnown RBP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.42□□□□□ -0.9
SHKBP1-206ENST00000595523 AQP6Q13520 282 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms