RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 PAX1P15863 534 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 NR4A1P22736 598 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 POU1F1P28069 291 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 APLNRP35414 380 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 SLC25A1P53007 311 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 ESRRGP62508 458 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 CDK5Q00535 292 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 PSG4Q00888 419 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 GALK2Q01415 458 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 AQP6Q13520 282 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 GINS1Q14691 196 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 TBC1D28Q2M2D7 210 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 MUC15Q8N387 334 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 SLC37A3Q8NCC5 494 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 RBM4Q9BWF3 364 aaKnown RBP22.31■■□□□ 1.16
TRIM28-204ENST00000594806 OR2H1Q9GZK4 316 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 CA10Q9NS85 328 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 CBLN4Q9NTU7 201 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 MYO9AB2RTY4 2548 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 RTTNQ86VV8 2226 aa22.31■■□□□ 1.16
TRIM28-204ENST00000594806 H3BNX3 289 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 SMPD2O60906 423 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 SCG5P05408 212 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 SOD3P08294 240 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 CENPAP49450 140 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 HGFACQ04756 655 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 DAG1Q14118 895 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 ZSCAN26Q16670 478 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 C11orf40Q8WZ69 217 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 TRAF4Q9BUZ4 470 aaPredicted RBP22.3■■□□□ 1.16
TRIM28-204ENST00000594806 SEMA6AQ9H2E6 1030 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 CXXC4Q9H2H0 198 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 CDH20Q9HBT6 801 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 SLC25A19Q9HC21 320 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 EMC7Q9NPA0 242 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 KRT84Q9NSB2 600 aa22.3■■□□□ 1.16
TRIM28-204ENST00000594806 GAAP10253 952 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 COX5BP10606 129 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 BMP4P12644 408 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 ART1P52961 327 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 BLVRAP53004 296 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 CRISP1P54107 249 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 RPS23P62266 143 aaKnown RBP22.29■■□□□ 1.16
TRIM28-204ENST00000594806 NKX6-1P78426 367 aaPredicted RBP22.29■■□□□ 1.16
TRIM28-204ENST00000594806 KDM4DQ6B0I6 523 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 CYB561A3Q8NBI2 242 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 SLC26A10Q8NG04 563 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 NMNAT2Q9BZQ4 307 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 KCNG2Q9UJ96 466 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 FBXO9Q9UK97 447 aaPredicted RBP22.29■■□□□ 1.16
TRIM28-204ENST00000594806 ITGB1BP2Q9UKP3 347 aa22.29■■□□□ 1.16
TRIM28-204ENST00000594806 OVOL3O00110 214 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 PAICSP22234 425 aaKnown RBP22.28■■□□□ 1.16
TRIM28-204ENST00000594806 STOMP27105 288 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 PCSK6P29122 969 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 CRMP1Q14194 572 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 ACSM5Q6NUN0 579 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 UGT2A3Q6UWM9 527 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 CPEB3Q8NE35 698 aaKnown RBP22.28■■□□□ 1.16
TRIM28-204ENST00000594806 OR10H5Q8NGA6 315 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 FOXN4Q96NZ1 517 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 PKP2Q99959 881 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 GSX2Q9BZM3 304 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 WNT5BQ9H1J7 359 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 S100A14Q9HCY8 104 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 ZNF701Q9NV72 531 aaPredicted RBP22.28■■□□□ 1.16
TRIM28-204ENST00000594806 NDRG4Q9ULP0 352 aaKnown RBP22.28■■□□□ 1.16
TRIM28-204ENST00000594806 OAZ3Q9UMX2 235 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 POLR1DQ9Y2S0 133 aa22.28■■□□□ 1.16
TRIM28-204ENST00000594806 CSMD2Q7Z408 3487 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 MPZL1O95297 269 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 CD8AP01732 235 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 GLRXP35754 106 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 GDI2P50395 445 aaKnown RBP22.27■■□□□ 1.16
TRIM28-204ENST00000594806 TEKQ02763 1124 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 SNTB2Q13425 540 aaKnown RBP22.27■■□□□ 1.16
TRIM28-204ENST00000594806 UNQ6126/PRO20091Q6UXV3 157 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 C1orf174Q8IYL3 243 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 IQCF1Q8N6M8 205 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 PROKR2Q8NFJ6 384 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 GJC3Q8NFK1 279 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 AKR7LQ8NHP1 331 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 RBM4BQ9BQ04 359 aaKnown RBP22.27■■□□□ 1.16
TRIM28-204ENST00000594806 PRRG3Q9BZD7 231 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 FN3KQ9H479 309 aa22.27■■□□□ 1.16
TRIM28-204ENST00000594806 SGCEO43556 437 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 HLA-DQA2P01906 255 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 APEX1P27695 318 aaKnown RBP22.26■■□□□ 1.15
TRIM28-204ENST00000594806 SERPINF1P36955 418 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 RAD52P43351 418 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 TESK1Q15569 626 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 ICA1LQ8NDH6 482 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 TRMT61AQ96FX7 289 aaKnown RBP22.26■■□□□ 1.15
TRIM28-204ENST00000594806 POM121L2Q96KW2 1035 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 ASH2LQ9UBL3 628 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 ATPIF1Q9UII2 106 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 USF3Q68DE3 2245 aa22.26■■□□□ 1.15
TRIM28-204ENST00000594806 PRRC2AP48634 2157 aaKnown RBP22.25■■□□□ 1.15
TRIM28-204ENST00000594806 B9A039 149 aa22.25■■□□□ 1.15
TRIM28-204ENST00000594806 SURF4O15260 269 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms