RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MPZL1O95297 269 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 GAAP10253 952 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 BMP4P12644 408 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 GLRXP35754 106 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 RPS23P62266 143 aaKnown RBP12.56□□□□□ -0.4
VRK3-206ENST00000594090 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
VRK3-206ENST00000594090 SNRPD2P62316 118 aaKnown RBP12.56□□□□□ -0.4
VRK3-206ENST00000594090 OTPQ5XKR4 325 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 SHQ1Q6PI26 577 aaKnown RBP12.56□□□□□ -0.4
VRK3-206ENST00000594090 ZBTB46Q86UZ6 589 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 OR6V1Q8N148 313 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 LNX2Q8N448 690 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 NPEPL1Q8NDH3 523 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 OR2T33Q8NG76 320 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 OR1J2Q8NGS2 313 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 C11orf40Q8WZ69 217 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 DUS3LQ96G46 650 aaKnown RBP12.56□□□□□ -0.4
VRK3-206ENST00000594090 Q96MF0 132 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 WACQ9BTA9 647 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 TMUB1Q9BVT8 246 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 REV1Q9UBZ9 1251 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 GDF2Q9UK05 429 aaPredicted RBP12.56□□□□□ -0.4
VRK3-206ENST00000594090 B9D1Q9UPM9 204 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 TIMM10BQ9Y5J6 103 aa12.56□□□□□ -0.4
VRK3-206ENST00000594090 VSTM5A8MXK1 200 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 GPANK1O95872 356 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 STOMP27105 288 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 CENPAP49450 140 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 SCRN3Q0VDG4 424 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 DBPQ10586 325 aaPredicted RBP12.55□□□□□ -0.4
VRK3-206ENST00000594090 AQP6Q13520 282 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 ATP6AP1Q15904 470 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 MSMPQ1L6U9 139 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 SLC36A3Q495N2 470 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 ZNF362Q5T0B9 420 aaPredicted RBP12.55□□□□□ -0.4
VRK3-206ENST00000594090 TEX47Q8TBZ9 253 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 NRBF2Q96F24 287 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 POM121L2Q96KW2 1035 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 PLK3Q9H4B4 646 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 ZNF556Q9HAH1 456 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 BARX1Q9HBU1 254 aaPredicted RBP12.55□□□□□ -0.4
VRK3-206ENST00000594090 SRA1Q9HD15 236 aaKnown RBP12.55□□□□□ -0.4
VRK3-206ENST00000594090 CMAHPQ9Y471 501 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 AP4S1Q9Y587 144 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 FKBP7Q9Y680 259 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 PMF1-BGLAPU3KQ54 211 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 USF3Q68DE3 2245 aa12.55□□□□□ -0.4
VRK3-206ENST00000594090 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 H3BN98 237 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 FAM157BP0CG42 384 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 ANXA8P13928 327 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 CD99P14209 185 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 PRKACGP22612 351 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 CCNOP22674 350 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 PCSK6P29122 969 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 GDI2P50395 445 aaKnown RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 ARHGDIAP52565 204 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 GLO1Q04760 184 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 KCNMB1Q16558 191 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 ZNF774Q6NX45 483 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 ALDH16A1Q8IZ83 802 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 SVOPLQ8N434 492 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 IQCF1Q8N6M8 205 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 SLC26A10Q8NG04 563 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 MRPL24Q96A35 216 aaKnown RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 DDOQ99489 341 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 OR51B6Q9H340 312 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 KLHL21Q9UJP4 597 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 VPS13CQ709C8 3753 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 ARID1AO14497 2285 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 ZNF469Q96JG9 3925 aaPredicted RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 TMEM129A0AVI4 362 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 C5orf49A4QMS7 147 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 SGCEO43556 437 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 DOK2O60496 412 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 FCGR1AP12314 374 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 FASP25445 335 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 CRMP1Q14194 572 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 RAB35Q15286 201 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 MEP1BQ16820 701 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 VASH1Q7L8A9 365 aaPredicted RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 ATG16L2Q8NAA4 619 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 OR2T4Q8NH00 348 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 OR5K1Q8NHB7 308 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 DOK1Q99704 481 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 RBM4Q9BWF3 364 aaKnown RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 MRPL37Q9BZE1 423 aaKnown RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 DLL4Q9NR61 685 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 FBXO9Q9UK97 447 aaPredicted RBP12.54□□□□□ -0.4
VRK3-206ENST00000594090 POLR1DQ9Y2S0 133 aa12.54□□□□□ -0.4
VRK3-206ENST00000594090 RIIAD1A6NNX1 92 aa12.53□□□□□ -0.4
VRK3-206ENST00000594090 FAM171A2A8MVW0 826 aa12.53□□□□□ -0.4
VRK3-206ENST00000594090 IFNGP01579 166 aa12.53□□□□□ -0.4
VRK3-206ENST00000594090 TFP02787 698 aa12.53□□□□□ -0.4
VRK3-206ENST00000594090 COX5BP10606 129 aa12.53□□□□□ -0.4
VRK3-206ENST00000594090 OSMP13725 252 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms