RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF133P52736 654 aaPredicted RBP12.53□□□□□ -0.4
PNKP-202ENST00000593706 GNGT1P63211 74 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 NRN1LQ496H8 165 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 IFI44LQ53G44 452 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 ARMC4Q5T2S8 1044 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 CPLX4Q7Z7G2 160 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 MOSPD2Q8NHP6 518 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 ASB10Q8WXI3 467 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 CCL17Q92583 94 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 MCHR2Q969V1 340 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 CCNB1IP1Q9NPC3 277 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 UBAP1Q9NZ09 502 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 HIF3AQ9Y2N7 669 aa12.53□□□□□ -0.4
PNKP-202ENST00000593706 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 CENPBD1B2RD01 187 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 MAKP20794 623 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 GATA3P23771 443 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 STOMP27105 288 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 YAP1P46937 504 aaKnown RBP12.52□□□□□ -0.41
PNKP-202ENST00000593706 DAP3P51398 398 aaKnown RBP12.52□□□□□ -0.41
PNKP-202ENST00000593706 AWAT1Q58HT5 328 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 PABPC1L2AQ5JQF8 200 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 FAM209AQ5JX71 171 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 SPATA46Q5T0L3 261 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 FAM86B1Q8N7N1 296 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 LRRC75AQ8NAA5 344 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 CPEB3Q8NE35 698 aaKnown RBP12.52□□□□□ -0.41
PNKP-202ENST00000593706 IPCEF1Q8WWN9 437 aaPredicted RBP12.52□□□□□ -0.41
PNKP-202ENST00000593706 C22orf15Q8WYQ4 148 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 BPIFA2Q96DR5 249 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 C7orf34Q96L11 122 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 C7orf69Q9H7B7 122 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 INIPQ9NRY2 104 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 RHCGQ9UBD6 479 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
PNKP-202ENST00000593706 A0A087WUU8 490 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 GSTA4O15217 222 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 SPRY3O43610 288 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 SLC2A10O95528 541 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 IGHMP01871 453 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 SEMG1P04279 462 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 MMP7P09237 267 aaPredicted RBP12.51□□□□□ -0.41
PNKP-202ENST00000593706 HSD17B1P14061 328 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 FPR2P25090 351 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 LCN2P80188 198 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 PRKCDQ05655 676 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 SLC3A1Q07837 685 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 TRAM2Q15035 370 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 ZNF718Q3SXZ3 478 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 UNQ6126/PRO20091Q6UXV3 157 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
PNKP-202ENST00000593706 NRMQ8IXM6 262 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 FAM156AQ8NDB6 213 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 ST7LQ8TDW4 575 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 ACOT11Q8WXI4 607 aaPredicted RBP12.51□□□□□ -0.41
PNKP-202ENST00000593706 EGLN1Q9GZT9 426 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 ANKRD19PQ9H560 264 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 ESM1Q9NQ30 184 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 DDX28Q9NUL7 540 aaKnown RBP12.51□□□□□ -0.41
PNKP-202ENST00000593706 DCAF13Q9NV06 445 aaKnown RBP12.51□□□□□ -0.41
PNKP-202ENST00000593706 ARL8BQ9NVJ2 186 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 NDUFAF4Q9P032 175 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 EIF3KQ9UBQ5 218 aaKnown RBP12.51□□□□□ -0.41
PNKP-202ENST00000593706 CD300AQ9UGN4 299 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 EGFL7Q9UHF1 273 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 UGT2A1Q9Y4X1 527 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 PPIAL4AQ9Y536 164 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 ENPP4Q9Y6X5 453 aa12.51□□□□□ -0.41
PNKP-202ENST00000593706 C5orf49A4QMS7 147 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 DYNC1I1O14576 645 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 CDC42EP2O14613 210 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 TRMUO75648 421 aaKnown RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 IGHV1-46P01743 117 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 IFI30P13284 250 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 ACADSP16219 412 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 ZNF26P17031 533 aaPredicted RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 ZNF32P17041 273 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 CDAP32320 146 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 GDI2P50395 445 aaKnown RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 UBA52P62987 128 aaKnown RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 CD47Q08722 323 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 LAPTM4AQ15012 233 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 C10orf128Q5T292 105 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 MBOAT2Q6ZWT7 520 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 ZNF101Q8IZC7 436 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 PGAM4Q8N0Y7 254 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 RNF148Q8N7C7 305 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 SLC7A13Q8TCU3 470 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 HDAC2Q92769 488 aaKnown RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 FAM162AQ96A26 154 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 DHRS1Q96LJ7 313 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 FUZQ9BT04 418 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 FNDC11Q9BVV2 318 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 TXNIPQ9H3M7 391 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 GORASP2Q9H8Y8 452 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 NMNAT1Q9HAN9 279 aaPredicted RBP12.5□□□□□ -0.41
PNKP-202ENST00000593706 SIAEQ9HAT2 523 aa12.5□□□□□ -0.41
PNKP-202ENST00000593706 NTN4Q9HB63 628 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms