RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 IFI30P13284 250 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 GUCA1AP43080 201 aaPredicted RBP20.26■□□□□ 0.83
LSM4-202ENST00000593564 LRRC23Q53EV4 343 aaPredicted RBP20.26■□□□□ 0.83
LSM4-202ENST00000593564 ZMAT1Q5H9K5 638 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 C3orf56Q8N813 242 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 LRRC75AQ8NAA5 344 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 PRRC1Q96M27 445 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 SLC6A7Q99884 636 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 TMEM120AQ9BXJ8 343 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 OPN4Q9UHM6 478 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 A4GNTQ9UNA3 340 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 DYSFO75923 2080 aa20.26■□□□□ 0.83
LSM4-202ENST00000593564 ISPDA4D126 451 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 A6NIZ1 184 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 FAM220BPB1ANY3 271 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 NGFP01138 241 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 FSHBP01225 129 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 KDELR2P33947 212 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 ARHGDIAP52565 204 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 CTXN1P60606 82 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 RAP1BP61224 184 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 RAP1AP62834 184 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 ZNF774Q6NX45 483 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 C7orf69Q9H7B7 122 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 ELOVL3Q9HB03 270 aa20.25■□□□□ 0.83
LSM4-202ENST00000593564 MSR1P21757 451 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 IFNA8P32881 189 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 ENDOGQ14249 297 aaKnown RBP20.24■□□□□ 0.83
LSM4-202ENST00000593564 ZNF771Q7L3S4 317 aaPredicted RBP20.24■□□□□ 0.83
LSM4-202ENST00000593564 SYT9Q86SS6 491 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 IGFN1Q86VF2 1251 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 BPIFB2Q8N4F0 458 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 GEMIN6Q8WXD5 167 aaKnown RBP20.24■□□□□ 0.83
LSM4-202ENST00000593564 TPD52L3Q96J77 140 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 C4orf45Q96LM5 186 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 UBAP1Q9NZ09 502 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 MGAM2Q2M2H8 2515 aa20.24■□□□□ 0.83
LSM4-202ENST00000593564 PPIAL4EA0A075B759 164 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 PPIAL4CA0A0B4J2A2 164 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 PPIAL4DF5H284 164 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 SPRY1O43609 319 aaPredicted RBP20.23■□□□□ 0.83
LSM4-202ENST00000593564 PPIAL4FP0DN26 164 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 SELENOWP63302 87 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 LCN2P80188 198 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 KLF10Q13118 480 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 FHL1Q13642 323 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 MAPRE2Q15555 327 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 ANKDD1AQ495B1 522 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 MTX3Q5HYI7 312 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 ARL9Q6T311 187 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 ZER1Q7Z7L7 766 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 TREML1Q86YW5 311 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 NRMQ8IXM6 262 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 OFCC1Q8IZS5 231 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 OR2T12Q8NG77 320 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 OR51A7Q8NH64 312 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 ST7LQ8TDW4 575 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 WACQ9BTA9 647 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 MSL2Q9HCI7 577 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 ESM1Q9NQ30 184 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 NDRG4Q9ULP0 352 aaKnown RBP20.23■□□□□ 0.83
LSM4-202ENST00000593564 NPTNQ9Y639 398 aa20.23■□□□□ 0.83
LSM4-202ENST00000593564 TRAV27A0A087WT01 109 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 A0A1W2PPL8 197 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 C12orf71A8MTZ7 269 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 PRSS23O95084 383 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 COX5BP10606 129 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 FUT4P22083 530 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 PSG7Q13046 419 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 CDK5R2Q13319 367 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 SPRNQ5BIV9 151 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 HDXQ7Z353 690 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 ZDHHC22Q8N966 263 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 PCYOX1LQ8NBM8 494 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 SGMS2Q8NHU3 365 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 VIPAS39Q9H9C1 493 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 POLE4Q9NR33 117 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 MAN2C1Q9NTJ4 1040 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 GID8Q9NWU2 228 aa20.22■□□□□ 0.83
LSM4-202ENST00000593564 TANC2Q9HCD6 1990 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 TIMM8AO60220 97 aaPredicted RBP20.21■□□□□ 0.83
LSM4-202ENST00000593564 FOXH1O75593 365 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 ABHD16AO95870 558 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 IGHV2-70P01814 119 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 TUBG1P23258 451 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 FPR2P25090 351 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 TNFAIP6P98066 277 aaPredicted RBP20.21■□□□□ 0.83
LSM4-202ENST00000593564 PRKCDQ05655 676 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 OAFQ86UD1 273 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 MICU2Q8IYU8 434 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 NPEPL1Q8NDH3 523 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 LZICQ8WZA0 190 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 SAR1AQ9NR31 198 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 TUBG2Q9NRH3 451 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 TBCCD1Q9NVR7 557 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 ARHGAP32A7KAX9 2087 aa20.21■□□□□ 0.83
LSM4-202ENST00000593564 ELOVL7A1L3X0 281 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 EFCAB9A8MZ26 197 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 SCG5P05408 212 aa20.2■□□□□ 0.82
LSM4-202ENST00000593564 EGR1P18146 543 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms