RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CGGBP1Q9UFW8 167 aaPredicted RBP13.81□□□□□ -0.2
LIG1-205ENST00000593425 HIF3AQ9Y2N7 669 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 MED31Q9Y3C7 131 aa13.81□□□□□ -0.2
LIG1-205ENST00000593425 PPIAL4EA0A075B759 164 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 PPIAL4CA0A0B4J2A2 164 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 PPIAL4DF5H284 164 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 H3BSA7 217 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 TMPRSS2O15393 492 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 FOXH1O75593 365 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 IGHMP01871 453 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 CST2P09228 141 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 PPIAL4FP0DN26 164 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 HKR1P10072 659 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 FUT4P22083 530 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 LIPAP38571 399 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 TNFAIP6P98066 277 aaPredicted RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 PSG7Q13046 419 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 ENDOGQ14249 297 aaKnown RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 TAF11Q15544 211 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 KLF17Q5JT82 389 aaPredicted RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 POP5Q969H6 163 aaKnown RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 LRRC58Q96CX6 371 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 ATP6V1G3Q96LB4 118 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 C4orf45Q96LM5 186 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 DUX5Q96PT3 197 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 ZNF747Q9BV97 191 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 POLR2J2Q9GZM3 115 aaKnown RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 POLR2J3Q9H1A7 115 aaKnown RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 ZNF69Q9UC07 566 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 PURGQ9UJV8 347 aaKnown RBP13.8□□□□□ -0.2
LIG1-205ENST00000593425 BAG5Q9UL15 447 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 ZDHHC8Q9ULC8 765 aa13.8□□□□□ -0.2
LIG1-205ENST00000593425 A0A1W2PPL8 197 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 GMNCA6NCL1 334 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 DNAJC9-AS1A6NH13 148 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 TRAPPC2LH3BP13 241 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 FXYD1O00168 92 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 TIMM8AO60220 97 aaPredicted RBP13.79□□□□□ -0.2
LIG1-205ENST00000593425 SCG5P05408 212 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 SBK2P0C263 348 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 NR2C1P13056 603 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
LIG1-205ENST00000593425 CDK5R2Q13319 367 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 ZMAT1Q5H9K5 638 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 ARMCX4Q5H9R4 360 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 MTX3Q5HYI7 312 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 PRR31Q5SQ13 230 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 DOK3Q7L591 496 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 TREML1Q86YW5 311 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 C1orf174Q8IYL3 243 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 ALDH16A1Q8IZ83 802 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 BCL6BQ8N143 479 aaPredicted RBP13.79□□□□□ -0.2
LIG1-205ENST00000593425 LRRC75AQ8NAA5 344 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 C1orf147Q96MC9 270 aaPredicted RBP13.79□□□□□ -0.2
LIG1-205ENST00000593425 ZNF48Q96MX3 618 aaPredicted RBP13.79□□□□□ -0.2
LIG1-205ENST00000593425 DIRC2Q96SL1 478 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 TMEM106BQ9NUM4 274 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 EGFL7Q9UHF1 273 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 TIMM10BQ9Y5J6 103 aa13.79□□□□□ -0.2
LIG1-205ENST00000593425 THRBP10828 461 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 IFI30P13284 250 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 ARHGDIAP52565 204 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 CTXN1P60606 82 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 FOXL1Q12952 345 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 ZNF154Q13106 437 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 Q6ZR03 302 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 MICU2Q8IYU8 434 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 BPIFA2Q96DR5 249 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 RBP7Q96R05 134 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 SIGLEC11Q96RL6 698 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 ELOVL3Q9HB03 270 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 PATZ1Q9HBE1 687 aaKnown RBP13.78□□□□□ -0.2
LIG1-205ENST00000593425 NUP50Q9UKX7 468 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 A4GNTQ9UNA3 340 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 POLR3KQ9Y2Y1 108 aaPredicted RBP13.78□□□□□ -0.2
LIG1-205ENST00000593425 INSIG2Q9Y5U4 225 aa13.78□□□□□ -0.2
LIG1-205ENST00000593425 H7C1C5 153 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 ABHD16AO95870 558 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 ZNF12P17014 697 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 MSR1P21757 451 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 PRTN3P24158 256 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 SLC6A9P48067 706 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 PCBD1P61457 104 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 LCN6P62502 163 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 FHL1Q13642 323 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 CYLC2Q14093 348 aaPredicted RBP13.77□□□□□ -0.21
LIG1-205ENST00000593425 ZMYND11Q15326 602 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 TMEM155Q4W5P6 130 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 LRRC23Q53EV4 343 aaPredicted RBP13.77□□□□□ -0.21
LIG1-205ENST00000593425 SHISA2Q6UWI4 295 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 RBMS3Q6XE24 437 aaKnown RBP13.77□□□□□ -0.21
LIG1-205ENST00000593425 ZNF283Q8N7M2 679 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 FNDC8Q8TC99 324 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 MAGEB18Q96M61 343 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 ECSITQ9BQ95 431 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 ZNF696Q9H7X3 374 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 EMC7Q9NPA0 242 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 POLE4Q9NR33 117 aa13.77□□□□□ -0.21
LIG1-205ENST00000593425 INTS9Q9NV88 658 aaKnown RBP13.77□□□□□ -0.21
LIG1-205ENST00000593425 PLEK2Q9NYT0 353 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms