RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 CEP78Q5JTW2 689 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 ESPNLQ6ZVH7 1005 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 CREB3L2Q70SY1 520 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 SYT9Q86SS6 491 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 GGNQ86UU5 652 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 LRRC28Q86X40 367 aaPredicted RBP10.62□□□□□ -0.71
NPC1-214ENST00000593280 CATSPERDQ86XM0 798 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 SAMD12Q8N8I0 201 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 TSEN15Q8WW01 171 aaKnown RBP10.62□□□□□ -0.71
NPC1-214ENST00000593280 ZCCHC4Q9H5U6 513 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 SEC61A2Q9H9S3 476 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 TIGARQ9NQ88 270 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 MALT1Q9UDY8 824 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 POLR1DQ9Y2S0 133 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 AK6Q9Y3D8 172 aaKnown RBP10.62□□□□□ -0.71
NPC1-214ENST00000593280 R4GMQ9 66 aa10.62□□□□□ -0.71
NPC1-214ENST00000593280 ZNF292O60281 2723 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 FREM2Q5SZK8 3169 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 PTPRBP23467 1997 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ANKRD61A6NGH8 418 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 PNPP00491 289 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 H2BFMP0C1H6 154 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ATF1P18846 271 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ELK1P19419 428 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 CSRP1P21291 193 aaKnown RBP10.61□□□□□ -0.71
NPC1-214ENST00000593280 ENPP1P22413 925 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 APEX1P27695 318 aaKnown RBP10.61□□□□□ -0.71
NPC1-214ENST00000593280 TALDO1P37837 337 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 CSNK1A1P48729 337 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 CARD18P57730 90 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 MADCAM1Q13477 382 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 IL18Q14116 193 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 TGIF1Q15583 401 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ATP1A1-AS1Q5TC04 95 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 CORO6Q6QEF8 472 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 DEGS2Q6QHC5 323 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ASB18Q6ZVZ8 466 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.61□□□□□ -0.71
NPC1-214ENST00000593280 UBQLNLQ8IYU4 475 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 RDH10Q8IZV5 341 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 GALNT16Q8N428 558 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 OR2V1Q8NHB1 315 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 SETD6Q8TBK2 473 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 RNF133Q8WVZ7 376 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 SLC39A7Q92504 469 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 PNPLA2Q96AD5 504 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ORAI1Q96D31 301 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 OR2M2Q96R28 347 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 SOSTQ9BQB4 213 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 SF3B5Q9BWJ5 86 aaKnown RBP10.61□□□□□ -0.71
NPC1-214ENST00000593280 ZNF703Q9H7S9 590 aaPredicted RBP10.61□□□□□ -0.71
NPC1-214ENST00000593280 TCF7L1Q9HCS4 588 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ASCL3Q9NQ33 180 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 PLA2G3Q9NZ20 509 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 ABRACLQ9P1F3 81 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 EXTL2Q9UBQ6 330 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 CYB5R1Q9UHQ9 305 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 SLC22A13Q9Y226 551 aa10.61□□□□□ -0.71
NPC1-214ENST00000593280 TRBV5-7A0A0A0MS05 114 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 ARPC4-TTLL3A0A0A6YYG9 625 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 ARGFXA6NJG6 315 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 H0YC42 278 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 LINC01387J3KSC0 135 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 SMAD9O15198 467 aaKnown RBP10.6□□□□□ -0.71
NPC1-214ENST00000593280 SRSF10O75494 262 aaKnown RBP10.6□□□□□ -0.71
NPC1-214ENST00000593280 APOA1P02647 267 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 RAF1P04049 648 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 EIF4EP06730 217 aaKnown RBP10.6□□□□□ -0.71
NPC1-214ENST00000593280 LIPCP11150 499 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 EIF1AXP47813 144 aaKnown RBP10.6□□□□□ -0.71
NPC1-214ENST00000593280 RRADP55042 308 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 SCN1BQ07699 218 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 CDC20Q12834 499 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 BAK1Q16611 211 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 SULF2Q8IWU5 870 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 ZNF433Q8N7K0 673 aaPredicted RBP10.6□□□□□ -0.71
NPC1-214ENST00000593280 IL17RDQ8NFM7 739 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 OR6N1Q8NGY5 312 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 OR2AJ1Q8NGZ0 328 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 OR10AC1Q8NH08 325 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 TMEM54Q969K7 222 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 SLAMF6Q96DU3 332 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 ZNF385AQ96PM9 386 aaKnown RBP10.6□□□□□ -0.71
NPC1-214ENST00000593280 HES7Q9BYE0 225 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 C1orf198Q9H425 327 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 EMC7Q9NPA0 242 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 BRD7Q9NPI1 651 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 CYSLTR2Q9NS75 346 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 CENPMQ9NSP4 180 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 GLTPQ9NZD2 209 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 FBXL3Q9UKT7 428 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
NPC1-214ENST00000593280 A0A1W2PQ09 198 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 H3BSH0 61 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 CDK2AP1O14519 115 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 TMEM127O75204 238 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 PAHP00439 452 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 HPNP05981 417 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 CSF3P09919 207 aa10.59□□□□□ -0.71
NPC1-214ENST00000593280 SNRPBP14678 240 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms