RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TSPAN31Q12999 210 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 ALDH16A1Q8IZ83 802 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 OR4C15Q8NGM1 316 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 GNPDA2Q8TDQ7 276 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 CLPTM1LQ96KA5 538 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 ERMAPQ96PL5 475 aaPredicted RBP23.37■■□□□ 1.33
SMAD4-213ENST00000591914 PIMREGQ9BSJ6 248 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 TRIM15Q9C019 465 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 MS4A5Q9H3V2 200 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 EMC7Q9NPA0 242 aa23.37■■□□□ 1.33
SMAD4-213ENST00000591914 IGLV3-9A0A075B6K5 115 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 C5orf49A4QMS7 147 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 INAFM1C9JVW0 142 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 TNFRSF11BO00300 401 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 CD5LO43866 347 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 TP53P04637 393 aaPredicted RBP23.36■■□□□ 1.33
SMAD4-213ENST00000591914 DAOP14920 347 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 CCNOP22674 350 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 WNT5AP41221 380 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 ALDH3B1P43353 468 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 NR4A2P43354 598 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 GDI2P50395 445 aaKnown RBP23.36■■□□□ 1.33
SMAD4-213ENST00000591914 ERVS71-1P61550 626 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 KRTAP21-3Q3LHN1 58 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 ZNF774Q6NX45 483 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 ZNF620Q6ZNG0 422 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 GLB1L2Q8IW92 636 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 LINC00471Q8N535 108 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 CCDC124Q96CT7 223 aaKnown RBP23.36■■□□□ 1.33
SMAD4-213ENST00000591914 FOXN4Q96NZ1 517 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 NUAK2Q9H093 628 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 TPK1Q9H3S4 243 aa23.36■■□□□ 1.33
SMAD4-213ENST00000591914 ACOT8O14734 319 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 ICMTO60725 284 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 KHDRBS3O75525 346 aaKnown RBP23.35■■□□□ 1.33
SMAD4-213ENST00000591914 LCKP06239 509 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 USF1P22415 310 aaPredicted RBP23.35■■□□□ 1.33
SMAD4-213ENST00000591914 MAD2L1BPQ15013 274 aaPredicted RBP23.35■■□□□ 1.33
SMAD4-213ENST00000591914 CARTPTQ16568 116 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 TMEM249Q2WGJ8 235 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 ZNF770Q6IQ21 691 aaPredicted RBP23.35■■□□□ 1.33
SMAD4-213ENST00000591914 ZNF101Q8IZC7 436 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 SYNPRQ8TBG9 265 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 C11orf40Q8WZ69 217 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 SAMD8Q96LT4 415 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 BTBD10Q9BSF8 475 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 THTPAQ9BU02 230 aa23.35■■□□□ 1.33
SMAD4-213ENST00000591914 COA3Q9Y2R0 106 aaPredicted RBP23.35■■□□□ 1.33
SMAD4-213ENST00000591914 A0A1W2PPW3 197 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 UBOX5O94941 541 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 CLPTM1O96005 669 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 KLF3P57682 345 aaPredicted RBP23.34■■□□□ 1.33
SMAD4-213ENST00000591914 FAM98BQ52LJ0 330 aaKnown RBP23.34■■□□□ 1.33
SMAD4-213ENST00000591914 ZNF786Q8N393 782 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 OR9Q2Q8NGE9 314 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 OR1J1Q8NGS3 322 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 SNX18Q96RF0 628 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 IFT27Q9BW83 186 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 RERGLQ9H628 205 aa23.34■■□□□ 1.33
SMAD4-213ENST00000591914 EIF3KQ9UBQ5 218 aaKnown RBP23.34■■□□□ 1.33
SMAD4-213ENST00000591914 YLPM1P49750 1951 aaKnown RBP23.34■■□□□ 1.33
SMAD4-213ENST00000591914 STAMBPO95630 424 aa23.33■■□□□ 1.33
SMAD4-213ENST00000591914 GIFP27352 417 aa23.33■■□□□ 1.33
SMAD4-213ENST00000591914 SELENOVP59797 346 aa23.33■■□□□ 1.33
SMAD4-213ENST00000591914 LSM6P62312 80 aaKnown RBP23.33■■□□□ 1.33
SMAD4-213ENST00000591914 PPP2R2BQ00005 443 aa23.33■■□□□ 1.33
SMAD4-213ENST00000591914 SCRN3Q0VDG4 424 aa23.33■■□□□ 1.33
SMAD4-213ENST00000591914 AQP6Q13520 282 aa23.33■■□□□ 1.33
SMAD4-213ENST00000591914 DCTN6O00399 190 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 TLX2O43763 284 aaPredicted RBP23.32■■□□□ 1.32
SMAD4-213ENST00000591914 IDH3BO43837 385 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 MPZL1O95297 269 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 COX5BP10606 129 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 HIST1H1CP16403 213 aaKnown RBP23.32■■□□□ 1.32
SMAD4-213ENST00000591914 CRABP1P29762 137 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 TRAP1Q12931 704 aaKnown RBP23.32■■□□□ 1.32
SMAD4-213ENST00000591914 KCNMB1Q16558 191 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 OR2T5Q6IEZ7 315 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 DNM1P34Q6PK57 102 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 UNQ6126/PRO20091Q6UXV3 157 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 ICA1LQ8NDH6 482 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 ZNF540Q8NDQ6 660 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 OR2T29Q8NH02 315 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 UBASH3BQ8TF42 649 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 LRGUKQ96M69 825 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 TSSK2Q96PF2 358 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 NMNAT3Q96T66 252 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 VNN3Q9NY84 501 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 TAAR3PQ9P1P4 343 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 NDRG4Q9ULP0 352 aaKnown RBP23.32■■□□□ 1.32
SMAD4-213ENST00000591914 CDH10Q9Y6N8 788 aa23.32■■□□□ 1.32
SMAD4-213ENST00000591914 IGLV1-36A0A0B4J1U3 117 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 CCNB2O95067 398 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 NAT2P11245 290 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 NKPD1Q17RQ9 610 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 RPL13AP3Q6NVV1 102 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 LEG1Q6P5S2 330 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 JAZF1Q86VZ6 243 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 C1orf174Q8IYL3 243 aa23.31■■□□□ 1.32
SMAD4-213ENST00000591914 MARS2Q96GW9 593 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms