RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 PAX8Q06710 450 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 FMODQ06828 376 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 RPL18Q07020 188 aaKnown RBP13.37□□□□□ -0.27
DDX39A-216ENST00000591275 DUSP7Q16829 419 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 TMEM155Q4W5P6 130 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 ESCO2Q56NI9 601 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 ZMAT1Q5H9K5 638 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 PAGE3Q5JUK9 113 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 C10orf128Q5T292 105 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 UNQ6126/PRO20091Q6UXV3 157 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 LRRC28Q86X40 367 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-216ENST00000591275 GPR32P1Q8NGA4 272 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 OR4D11Q8NGI4 311 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 ADAMTS16Q8TE57 1224 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 WFDC12Q8WWY7 111 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 ASB10Q8WXI3 467 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 NSMAFQ92636 917 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 NABP1Q96AH0 204 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 SEPHS2Q99611 448 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 SLC19A3Q9BZV2 496 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 CGGBP1Q9UFW8 167 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-216ENST00000591275 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 UGT2A1Q9Y4X1 527 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 MMP24Q9Y5R2 645 aa13.37□□□□□ -0.27
DDX39A-216ENST00000591275 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 F5H0A9 414 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-216ENST00000591275 HOXA3O43365 443 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-216ENST00000591275 SNX3O60493 162 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 TGDSO95455 350 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 VIMP08670 466 aaKnown RBP13.36□□□□□ -0.27
DDX39A-216ENST00000591275 PPIBP23284 216 aaKnown RBP13.36□□□□□ -0.27
DDX39A-216ENST00000591275 UGT2B15P54855 530 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 PSG7Q13046 419 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 CDK5R2Q13319 367 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 OCLNQ16625 522 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 MTX3Q5HYI7 312 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 C17orf107Q6ZR85 190 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 C9orf139Q6ZV77 190 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 FUNDC1Q8IVP5 155 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 ZNF283Q8N7M2 679 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 CCDC197Q8NCU1 140 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 OR2Z1Q8NG97 314 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 PKP2Q99959 881 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 WNT5BQ9H1J7 359 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 EVA1AQ9H8M9 152 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 MEPEQ9NQ76 525 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-216ENST00000591275 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.36□□□□□ -0.27
DDX39A-216ENST00000591275 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
DDX39A-216ENST00000591275 TRBV5-3A0A0A0MS03 114 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 TRAPPC13A5PLN9 417 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 FAM181BA6NEQ2 426 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 ERICH4A6NGS2 130 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 GPX2P18283 190 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 AQP2P41181 271 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 ZNF133P52736 654 aaPredicted RBP13.35□□□□□ -0.27
DDX39A-216ENST00000591275 STX1BP61266 288 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 CD47Q08722 323 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 TAF11Q15544 211 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 BRICD5Q6PL45 260 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 Q6ZR03 302 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 LRRC8CQ8TDW0 803 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 ITLN1Q8WWA0 313 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 SPDL1Q96EA4 605 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 SIGLEC11Q96RL6 698 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 OR2H1Q9GZK4 316 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 POFUT1Q9H488 388 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 NANOGQ9H9S0 305 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 INIPQ9NRY2 104 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 CCDC167Q9P0B6 97 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 ARMCX1Q9P291 453 aa13.35□□□□□ -0.27
DDX39A-216ENST00000591275 CEACAM18A8MTB9 384 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 EVPLLA8MZ36 301 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 CENPBD1B2RD01 187 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 H3BSA7 217 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 M0QX08 132 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 ZNF205O95201 554 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 PLATP00750 562 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 TNFRSF1AP19438 455 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 TNFSF4P23510 183 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 LAP3P28838 519 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 MDH2P40926 338 aaKnown RBP13.34□□□□□ -0.27
DDX39A-216ENST00000591275 DAP3P51398 398 aaKnown RBP13.34□□□□□ -0.27
DDX39A-216ENST00000591275 ARHGDIAP52565 204 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 RAG2P55895 527 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 PCBP3P57721 371 aaKnown RBP13.34□□□□□ -0.27
DDX39A-216ENST00000591275 PAX2Q02962 417 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 DEFB112Q30KQ8 113 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 ZNF774Q6NX45 483 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 BLOC1S3Q6QNY0 202 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 BRD3OSQ6XYD6 125 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 HDDC2Q7Z4H3 204 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 MOSPD2Q8NHP6 518 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 HDAC2Q92769 488 aaKnown RBP13.34□□□□□ -0.27
DDX39A-216ENST00000591275 ZDHHC16Q969W1 377 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 UPRTQ96BW1 309 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 NMD3Q96D46 503 aaKnown RBP13.34□□□□□ -0.27
DDX39A-216ENST00000591275 C4orf45Q96LM5 186 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 SAMD8Q96LT4 415 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 ZNF426Q9BUY5 554 aa13.34□□□□□ -0.27
DDX39A-216ENST00000591275 SSBP3Q9BWW4 388 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms