RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 DCTN6O00399 190 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 TP53P04637 393 aaPredicted RBP10.28□□□□□ -0.76
LIG3-213ENST00000590630 OR4A8P0C604 315 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 FASP25445 335 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 STOMP27105 288 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 APLNRP35414 380 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 CDKN1AP38936 164 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 RPS23P62266 143 aaKnown RBP10.28□□□□□ -0.76
LIG3-213ENST00000590630 SNRPD2P62316 118 aaKnown RBP10.28□□□□□ -0.76
LIG3-213ENST00000590630 PSG4Q00888 419 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 SCRN3Q0VDG4 424 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 AQP6Q13520 282 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 EFNB3Q15768 340 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 KCNMB1Q16558 191 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 SWI5Q1ZZU3 235 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 SLC36A3Q495N2 470 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 Q5PR19 223 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 SLC35F1Q5T1Q4 408 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 KRT80Q6KB66 452 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 VHLLQ6RSH7 139 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 ZBTB46Q86UZ6 589 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 TGIF2LYQ8IUE0 185 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 KRTAP1-3Q8IUG1 177 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 HS3ST5Q8IZT8 346 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 OR6V1Q8N148 313 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 NPEPL1Q8NDH3 523 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 CPEB3Q8NE35 698 aaKnown RBP10.28□□□□□ -0.76
LIG3-213ENST00000590630 SDR9C7Q8NEX9 313 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 TSSK2Q96PF2 358 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 CACNG6Q9BXT2 260 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 CDH20Q9HBT6 801 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 EMC7Q9NPA0 242 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 REV1Q9UBZ9 1251 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 B9D1Q9UPM9 204 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 FKBP7Q9Y680 259 aa10.28□□□□□ -0.76
LIG3-213ENST00000590630 CHD3Q12873 2000 aaKnown RBP10.28□□□□□ -0.76
LIG3-213ENST00000590630 B9A039 149 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 IFNGP01579 166 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 SCG5P05408 212 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 GAAP10253 952 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 PRKACGP22612 351 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 APEX1P27695 318 aaKnown RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 PCSK6P29122 969 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 THBS4P35443 961 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 GLRXP35754 106 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 ACTR3P61158 418 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 MST1LQ2TV78 715 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 ZNF362Q5T0B9 420 aaPredicted RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 UGT2A3Q6UWM9 527 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 UNQ6126/PRO20091Q6UXV3 157 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 YTHDF3Q7Z739 585 aaKnown RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 HIPK1Q86Z02 1210 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 ATG16L2Q8NAA4 619 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 WFDC11Q8NEX6 87 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 SLC26A10Q8NG04 563 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 OR2T4Q8NH00 348 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 OR4Q3Q8NH05 313 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 OR5K1Q8NHB7 308 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 AKR7LQ8NHP1 331 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 FOXN4Q96NZ1 517 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 DDOQ99489 341 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 BCL2L14Q9BZR8 327 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 WNT5BQ9H1J7 359 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 PLK3Q9H4B4 646 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 BARX1Q9HBU1 254 aaPredicted RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 SRA1Q9HD15 236 aaKnown RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.27□□□□□ -0.77
LIG3-213ENST00000590630 KIF17Q9P2E2 1029 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 KLHL21Q9UJP4 597 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 POLR1DQ9Y2S0 133 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 CMAHPQ9Y471 501 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 PMF1-BGLAPU3KQ54 211 aa10.27□□□□□ -0.77
LIG3-213ENST00000590630 MTORP42345 2549 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 C5orf49A4QMS7 147 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 RIIAD1A6NNX1 92 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 G3V2T6 193 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 SGCEO43556 437 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 GPRIN2O60269 458 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 MPZL1O95297 269 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 COX5BP10606 129 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 CCL2P13500 99 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 OSMP13725 252 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 ZNF3P17036 446 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 GRK5P34947 590 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 RAD52P43351 418 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 CENPAP49450 140 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 EVX1P49640 407 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 GDI2P50395 445 aaKnown RBP10.26□□□□□ -0.77
LIG3-213ENST00000590630 ZNF774Q6NX45 483 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 SLC27A4Q6P1M0 643 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 FAHD1Q6P587 224 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 ZDHHC13Q8IUH4 622 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 C10orf67Q8IYJ2 551 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 PARP8Q8N3A8 854 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 PAQR4Q8N4S7 273 aaPredicted RBP10.26□□□□□ -0.77
LIG3-213ENST00000590630 CYB561A3Q8NBI2 242 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 SLC37A3Q8NCC5 494 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 C11orf40Q8WZ69 217 aa10.26□□□□□ -0.77
LIG3-213ENST00000590630 MRPL24Q96A35 216 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms