RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PRAMEF20Q5VT98 475 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 RELL2Q8NC24 303 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 MMP25Q9NPA2 562 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 ZNF638Q14966 1978 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 LGALS8O00214 317 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 NUDT21O43809 227 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 CDKN2AP42771 156 aaKnown RBP15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 PPP1CAP62136 330 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 GABREP78334 506 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 FAM53BQ14153 422 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 C1orf53Q5VUE5 145 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 FAM122CQ6P4D5 195 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 PBDC1Q9BVG4 233 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 CHRDQ9H2X0 955 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 KIF25Q9UIL4 384 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 B9D1Q9UPM9 204 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 A0A1B0GX78 115 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 SCRG1O75711 98 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 ERGP11308 486 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 COL9A1P20849 921 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 C9orf62Q8N4C0 152 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 OR11H7Q8NGC8 314 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 LRRC46Q96FV0 321 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 HAO2Q9NYQ3 351 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 RAG2P55895 527 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 ZNF169Q14929 603 aaPredicted RBP15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 TSC22D1Q15714 1073 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 C14orf28Q4W4Y0 310 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 LPCAT3Q6P1A2 487 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 ZAR1Q86SH2 424 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 HSD17B8Q92506 261 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 SIGLEC11Q96RL6 698 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 CHRNA9Q9UGM1 479 aa15.53■□□□□ 0.08
SMARCA4-215ENST00000590574 GLSO94925 669 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 NDUFB6O95139 128 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 HSF1Q00613 529 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 SRSF5Q13243 272 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 TEX19Q8NA77 164 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 FAM71CQ8NEG0 241 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 ST8SIA4Q92187 359 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 SDHCQ99643 169 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 TXNIPQ9H3M7 391 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 BANF2Q9H503 90 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 RPS10P5Q9NQ39 176 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 FRG2CA6NGY1 282 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 GJE1A6NN92 205 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 BLVRBP30043 206 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 CAV2P51636 162 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 MEX3BQ6ZN04 569 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 HSPB2A8KAH6 182 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 ATP6V1G2-DDX39BF2Z307 99 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 NRG2O14511 850 aaPredicted RBP15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 TMEM127O75204 238 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 SELENOPP49908 381 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 SLC25A1P53007 311 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 HSPB2Q16082 182 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 TAAR8Q969N4 342 aa15.52■□□□□ 0.08
SMARCA4-215ENST00000590574 SDK1Q7Z5N4 2213 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 OR5H14A6NHG9 310 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 ARPC3O15145 178 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF687Q8N1G0 1237 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 OR6C1Q96RD1 312 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 D6RAR5 112 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 IMPA2O14732 288 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 OGG1O15527 345 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 RGS11O94810 467 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 SYNGR4O95473 234 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 S100A2P29034 98 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 PLP2Q04941 152 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 SIGIRRQ6IA17 410 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 CCDC71LQ8N9Z2 235 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 OR1M1Q8NGA1 313 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 OTOSQ8NHW6 89 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 ENKD1Q9H0I2 346 aa15.52■□□□□ 0.07
SMARCA4-215ENST00000590574 PIKFYVEQ9Y2I7 2098 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 IL5P05113 134 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 OTX2P32243 289 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 ZBTB44Q8NCP5 570 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 MAFIPQ8WZ33 124 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF775Q96BV0 537 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 R4GMQ9 66 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 CD27P26842 260 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 ZNF136P52737 540 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 EBPQ15125 230 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 NR0B2Q15466 257 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 ELFN2Q5R3F8 820 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 OR52N5Q8NH56 324 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 OR51E1Q8TCB6 317 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 SLAMF6Q96DU3 332 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 PTRH2Q9Y3E5 179 aaKnown RBP15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 GREB1Q4ZG55 1949 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 PGAP1Q75T13 922 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 SUSD2Q9UGT4 822 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 SPTY2D1-AS1A0A0U1RR47 76 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 SPINT1O43278 529 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 GMDSO60547 372 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 MAP2K6P52564 334 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 SRYQ05066 204 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 WDR38Q5JTN6 314 aa15.51■□□□□ 0.07
SMARCA4-215ENST00000590574 MDGA2Q7Z553 956 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms