RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MAD2L1BPQ15013 274 aaPredicted RBP11.9□□□□□ -0.5
VMP1-210ENST00000589823 MEP1BQ16820 701 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 GSG1Q2KHT4 349 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 LYPD4Q6UWN0 246 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 SYT9Q86SS6 491 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 ERI1Q8IV48 349 aaKnown RBP11.9□□□□□ -0.5
VMP1-210ENST00000589823 DMRTC2Q8IXT2 367 aaPredicted RBP11.9□□□□□ -0.5
VMP1-210ENST00000589823 OR2AJ1Q8NGZ0 328 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 INTS14Q96SY0 518 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 Q9H521 79 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 MRPL22Q9NWU5 206 aaKnown RBP11.9□□□□□ -0.5
VMP1-210ENST00000589823 WARS2Q9UGM6 360 aaKnown RBP11.9□□□□□ -0.5
VMP1-210ENST00000589823 RAB26Q9ULW5 256 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.9□□□□□ -0.5
VMP1-210ENST00000589823 COMMD3-BMI1R4GMX3 469 aa11.9□□□□□ -0.5
VMP1-210ENST00000589823 HELZ2Q9BYK8 2649 aaKnown RBP11.9□□□□□ -0.51
VMP1-210ENST00000589823 SPTBN1Q01082 2364 aaKnown RBP11.89□□□□□ -0.51
VMP1-210ENST00000589823 THBDP07204 575 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 GNAO1P09471 354 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 PATE4P0C8F1 98 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 IGFBP2P18065 325 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 GABRB1P18505 474 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 ENTPD1P49961 510 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 PLP2Q04941 152 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 SCRN3Q0VDG4 424 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 TMED1Q13445 227 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 OTPQ5XKR4 325 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 B3GLCTQ6Y288 498 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 USP51Q70EK9 711 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 THAP5Q7Z6K1 395 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 MDP1Q86V88 176 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 OR6N2Q8NGY6 317 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 FAM222BQ8WU58 562 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 FBXO17Q96EF6 278 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 SPOCK3Q9BQ16 436 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 C1QTNF6Q9BXI9 259 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 WDR76Q9H967 626 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 B3GNT2Q9NY97 397 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 ZNF224Q9NZL3 707 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 CRIM1Q9NZV1 1036 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 ASH2LQ9UBL3 628 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 AASSQ9UDR5 926 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 FBXL3Q9UKT7 428 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 TIMM10BQ9Y5J6 103 aa11.89□□□□□ -0.51
VMP1-210ENST00000589823 TENM4Q6N022 2769 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 ZNF593O00488 134 aaPredicted RBP11.88□□□□□ -0.51
VMP1-210ENST00000589823 PTHP01270 115 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 SPARCP09486 303 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 EPXP11678 715 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 COX6B1P14854 86 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 CBR1P16152 277 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 ZNF32P17041 273 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 ATP6V1E1P36543 226 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 NAA10P41227 235 aaPredicted RBP11.88□□□□□ -0.51
VMP1-210ENST00000589823 ZNF83P51522 516 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 ISL1P61371 349 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 POU4F2Q12837 409 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 GGTLC2Q14390 218 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 TEX30Q5JUR7 227 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 SP5Q6BEB4 398 aaPredicted RBP11.88□□□□□ -0.51
VMP1-210ENST00000589823 C22orf34Q6ZV56 151 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 SHFQ7M4L6 423 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 SLC16A9Q7RTY1 509 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 LINC00346Q8IVM7 164 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 TIGD4Q8IY51 512 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 ALDH16A1Q8IZ83 802 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 FAM169BQ8N8A8 192 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 GJC3Q8NFK1 279 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 FGFBP3Q8TAT2 258 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 CNIH3Q8TBE1 160 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 PSMG3-AS1Q96PY0 264 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 CNN2Q99439 309 aaKnown RBP11.88□□□□□ -0.51
VMP1-210ENST00000589823 ANKRD60Q9BZ19 345 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 HAO2Q9NYQ3 351 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 CYB5R1Q9UHQ9 305 aa11.88□□□□□ -0.51
VMP1-210ENST00000589823 LRRK2Q5S007 2527 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 IQCMA0A1B0GVH7 501 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 ZNF503-AS2A6NEH8 195 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 M0R1B8 84 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 SELENOFO60613 162 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 MRPL3P09001 348 aaKnown RBP11.87□□□□□ -0.51
VMP1-210ENST00000589823 MMP7P09237 267 aaPredicted RBP11.87□□□□□ -0.51
VMP1-210ENST00000589823 CRYGSP22914 178 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 MYF6P23409 242 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 RPS27P42677 84 aaKnown RBP11.87□□□□□ -0.51
VMP1-210ENST00000589823 MTNR1AP48039 350 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 NUDT6P53370 316 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 C3orf36Q3SXR2 165 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 PABPC1L2AQ5JQF8 200 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 SLC18B1Q6NT16 456 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 CORO6Q6QEF8 472 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 OR51G2Q8NGK0 314 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 APH1BQ8WW43 257 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 OR2H1Q9GZK4 316 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 YIPF3Q9GZM5 350 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 C1orf198Q9H425 327 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 NOX3Q9HBY0 568 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 PLEK2Q9NYT0 353 aa11.87□□□□□ -0.51
VMP1-210ENST00000589823 RPL36Q9Y3U8 105 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms