RNA–Protein interactions for RNA: ENST00000589733.1

MBD1-219, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2

Gene MBD1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-219ENST00000589733 EMC7Q9NPA0 242 aa13.2□□□□□ -0.3
MBD1-219ENST00000589733 RPRD1BQ9NQG5 326 aaKnown RBP13.2□□□□□ -0.3
MBD1-219ENST00000589733 ARMC1Q9NVT9 282 aa13.2□□□□□ -0.3
MBD1-219ENST00000589733 KLHL21Q9UJP4 597 aa13.2□□□□□ -0.3
MBD1-219ENST00000589733 NDRG4Q9ULP0 352 aaKnown RBP13.2□□□□□ -0.3
MBD1-219ENST00000589733 COA3Q9Y2R0 106 aaPredicted RBP13.2□□□□□ -0.3
MBD1-219ENST00000589733 DOK2O60496 412 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
MBD1-219ENST00000589733 STOMP27105 288 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 APEX1P27695 318 aaKnown RBP13.19□□□□□ -0.3
MBD1-219ENST00000589733 PSG4Q00888 419 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 SWI5Q1ZZU3 235 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 SLC36A3Q495N2 470 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 SHQ1Q6PI26 577 aaKnown RBP13.19□□□□□ -0.3
MBD1-219ENST00000589733 KRTAP1-3Q8IUG1 177 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 LURAP1LQ8IV03 231 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 ATG16L2Q8NAA4 619 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 OR10H5Q8NGA6 315 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 AKR7LQ8NHP1 331 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 NRBF2Q96F24 287 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 FOXN4Q96NZ1 517 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 BCL2L14Q9BZR8 327 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 SRA1Q9HD15 236 aaKnown RBP13.19□□□□□ -0.3
MBD1-219ENST00000589733 DYNLRB1Q9NP97 96 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 AP4S1Q9Y587 144 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 FKBP7Q9Y680 259 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 USF3Q68DE3 2245 aa13.19□□□□□ -0.3
MBD1-219ENST00000589733 ARFGEF3Q5TH69 2177 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 IGLV1-36A0A0B4J1U3 117 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 RIIAD1A6NNX1 92 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 SGCEO43556 437 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 CD99P14209 185 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 ZNF3P17036 446 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 CCNOP22674 350 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 FASP25445 335 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 PCSK6P29122 969 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 RAD52P43351 418 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 PPOXP50336 477 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 NUDT6P53370 316 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 CCNIQ14094 377 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 KCNMB1Q16558 191 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 RGS7BPQ6MZT1 257 aaPredicted RBP13.18□□□□□ -0.3
MBD1-219ENST00000589733 ARL9Q6T311 187 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 UGT2A3Q6UWM9 527 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 TMEM179BQ7Z7N9 219 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 ZBTB46Q86UZ6 589 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 OR6V1Q8N148 313 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 OR2T4Q8NH00 348 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 OR5K1Q8NHB7 308 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 C11orf40Q8WZ69 217 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 MRPL24Q96A35 216 aaKnown RBP13.18□□□□□ -0.3
MBD1-219ENST00000589733 DUS3LQ96G46 650 aaKnown RBP13.18□□□□□ -0.3
MBD1-219ENST00000589733 Q96MF0 132 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 TSSK2Q96PF2 358 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 TEX12Q9BXU0 123 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 WNT5BQ9H1J7 359 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 FN3KQ9H479 309 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 ASH2LQ9UBL3 628 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 EIF3KQ9UBQ5 218 aaKnown RBP13.18□□□□□ -0.3
MBD1-219ENST00000589733 B9D1Q9UPM9 204 aa13.18□□□□□ -0.3
MBD1-219ENST00000589733 C5orf49A4QMS7 147 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 OR6C68A6NDL8 312 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 GPRIN2O60269 458 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 IGHV4-39P01824 125 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 HLA-DQA2P01906 255 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 FAM157BP0CG42 384 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 GAAP10253 952 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 COX5BP10606 129 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 CCL2P13500 99 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 OSMP13725 252 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 GRK5P34947 590 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 HTR5AP47898 357 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 EVX1P49640 407 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 SELENOVP59797 346 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 ZNF774Q6NX45 483 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 SLC27A4Q6P1M0 643 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 HIPK1Q86Z02 1210 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 C1orf174Q8IYL3 243 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 SVOPLQ8N434 492 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 SLC37A3Q8NCC5 494 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 NPEPL1Q8NDH3 523 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 CPEB3Q8NE35 698 aaKnown RBP13.17□□□□□ -0.3
MBD1-219ENST00000589733 PROKR2Q8NFJ6 384 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 OR4Q3Q8NH05 313 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 UTP4Q969X6 686 aaKnown RBP13.17□□□□□ -0.3
MBD1-219ENST00000589733 POM121L2Q96KW2 1035 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 RAB3IPQ96QF0 476 aaPredicted RBP13.17□□□□□ -0.3
MBD1-219ENST00000589733 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 GDF2Q9UK05 429 aaPredicted RBP13.17□□□□□ -0.3
MBD1-219ENST00000589733 MED13LQ71F56 2210 aa13.17□□□□□ -0.3
MBD1-219ENST00000589733 DCTN6O00399 190 aa13.16□□□□□ -0.3
MBD1-219ENST00000589733 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
MBD1-219ENST00000589733 SCG5P05408 212 aa13.16□□□□□ -0.3
MBD1-219ENST00000589733 LCKP06239 509 aa13.16□□□□□ -0.3
MBD1-219ENST00000589733 IGFBP1P08833 259 aaPredicted RBP13.16□□□□□ -0.3
MBD1-219ENST00000589733 ZNF23P17027 643 aa13.16□□□□□ -0.3
MBD1-219ENST00000589733 PAICSP22234 425 aaKnown RBP13.16□□□□□ -0.3
MBD1-219ENST00000589733 POU1F1P28069 291 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms