RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 LINGO2Q7L985 606 aa18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 ZNF433Q8N7K0 673 aaPredicted RBP18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 MYDGFQ969H8 173 aa18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 S100PBPQ96BU1 408 aa18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 USB1Q9BQ65 265 aaKnown RBP18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 ULBP2Q9BZM5 246 aa18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 B3GAT2Q9NPZ5 323 aa18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 EXOGQ9Y2C4 368 aaKnown RBP18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 COMMD3-BMI1R4GMX3 469 aa18.65■□□□□ 0.58
R3HDM4-204ENST00000589428 TVP23AA6NH52 213 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 RAD51DO75771 328 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 ITGA5P08648 1049 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 SBK2P0C263 348 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 GAAP10253 952 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 EPXP11678 715 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 NAA10P41227 235 aaPredicted RBP18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 CENPAP49450 140 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 C9orf135Q5VTT2 229 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 STX19Q8N4C7 294 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 WFIKKN1Q96NZ8 548 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 CNN2Q99439 309 aaKnown RBP18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 FGF20Q9NP95 211 aaPredicted RBP18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 UGT2A1Q9Y4X1 527 aa18.64■□□□□ 0.57
R3HDM4-204ENST00000589428 J3QRE1 110 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 CASKO14936 926 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 SELENOFO60613 162 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 FADS2O95864 444 aaKnown RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 MT-ND2P03891 347 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 ATP6V1E1P36543 226 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 POU4F2Q12837 409 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 STK11Q15831 433 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 OTPQ5XKR4 325 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 GLB1L2Q8IW92 636 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 SLC26A10Q8NG04 563 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 SMAP2Q8WU79 429 aaPredicted RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 ZNF837Q96EG3 531 aaPredicted RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 ZC3HAV1LQ96H79 300 aaKnown RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 TMEM80Q96HE8 168 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 MARCH7Q9H992 704 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 MRPL22Q9NWU5 206 aaKnown RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 DIMT1Q9UNQ2 313 aaKnown RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 IRGMA1A4Y4 181 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 RAB36O95755 333 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 TFP02787 698 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 FOXG1P55316 489 aaPredicted RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 ROR2Q01974 943 aaKnown RBP18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 OR7E24Q6IFN5 339 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 PRSS48Q7RTY5 328 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 TIGD4Q8IY51 512 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 CCDC90BQ9GZT6 254 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 WDR76Q9H967 626 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 CRLF2Q9HC73 371 aa18.63■□□□□ 0.57
R3HDM4-204ENST00000589428 A0A1W2PPL8 197 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 DHHO43323 396 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 MPZL1O95297 269 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 IGHA1P01876 353 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 HLA-DQA2P01906 255 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 ATP6V1B1P15313 513 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 HOXC12P31275 282 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 CDAP32320 146 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 BLVRAP53004 296 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 SH3BGRP55822 239 aaPredicted RBP18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 MEP1BQ16820 701 aa18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 ERI1Q8IV48 349 aaKnown RBP18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 C1orf162Q8NEQ5 155 aaPredicted RBP18.62■□□□□ 0.57
R3HDM4-204ENST00000589428 A0A087WXM4 84 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 TRIM64CA6NLI5 447 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 RPL36A-HNRNPH2H7BZ11 118 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 PSKH1P11801 424 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 DCKP27707 260 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 LAP3P28838 519 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 HSF2Q03933 536 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 SPARTQ8N0X7 666 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 HTRA1Q92743 480 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 INTS14Q96SY0 518 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 GPR35Q9HC97 309 aa18.61■□□□□ 0.57
R3HDM4-204ENST00000589428 NBPF19A0A087WUL8 3843 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 MRPS14O60783 128 aaKnown RBP18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 SCG5P05408 212 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 GABRA6Q16445 453 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 CEACAM16Q2WEN9 425 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 TIMM23BQ5SRD1 257 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 FOXL2NBQ6ZUU3 175 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 P2RY8Q86VZ1 359 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 C17orf78Q8N4C9 275 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 OR10H4Q8NGA5 316 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 HSD17B8Q92506 261 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 C14orf79Q96F83 325 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 JAM3Q9BX67 310 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 CDCA4Q9BXL8 241 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 OR5H1A6NKK0 313 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 C12orf71A8MTZ7 269 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 HRGP04196 525 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 RPS27P42677 84 aaKnown RBP18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 HCCSP53701 268 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 IRF3Q14653 427 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 TAB1Q15750 504 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 ALKBH2Q6NS38 261 aa18.6■□□□□ 0.57
R3HDM4-204ENST00000589428 SSX8Q7RTT4 187 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms