RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	ZNF417	Q8TAU3	575 aa		13.81	□□□□□ -0.2
DDX39A-209	ENST00000589318	THOC3	Q96J01	351 aa	Known RBP	13.81	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZNF587	Q96SQ5	575 aa	Predicted RBP	13.81	□□□□□ -0.2
DDX39A-209	ENST00000589318	ASB6	Q9NWX5	421 aa		13.81	□□□□□ -0.2
DDX39A-209	ENST00000589318	CELSR3	Q9NYQ7	3312 aa		13.81	□□□□□ -0.2
DDX39A-209	ENST00000589318		G3V3Y1	287 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	AIP	O00170	330 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PLPP3	O14495	311 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PRAF2	O60831	178 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	TCRB	P04435	133 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	SBK2	P0C263	348 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	LIF	P15018	202 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	CD82	P27701	267 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	GPR85	P60893	370 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	RPS7	P62081	194 aa	Known RBP	13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	OPCML	Q14982	345 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	TGIF1	Q15583	401 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	DCAF10	Q5QP82	559 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	LEG1	Q6P5S2	330 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	LRFN4	Q6PJG9	635 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	ASCL5	Q7RTU5	278 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	BEST3	Q8N1M1	668 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	IL22RA1	Q8N6P7	574 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	OR5M1	Q8NGP8	315 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	MFSD8	Q8NHS3	518 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	POTEKP	Q9BYX7	375 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PTGES2	Q9H7Z7	377 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	NUDT15	Q9NV35	164 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	EXTL2	Q9UBQ6	330 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	FREM3	P0C091	2139 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318		A0A0G2JMM0	328 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318		A0A1W2PPB8	328 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318		A0A1W2PRS3	328 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	KIR3DP1	A8MWS1	328 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PROB1	E7EW31	1015 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	C11orf98	E9PRG8	122 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318		H3BML4	177 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	APOC1	P02654	83 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	CEACAM1	P13688	526 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	SPI1	P17947	270 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	ATP6V1E1	P36543	226 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	CD96	P40200	585 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	SLC16A1	P53985	500 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	ACSM1	Q08AH1	577 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	GGTLC2	Q14390	218 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	EMC4	Q5J8M3	183 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PYHIN1	Q6K0P9	492 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	JMJD6	Q6NYC1	403 aa	Predicted RBP	13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	CHMP1B	Q7LBR1	199 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	ACBD7	Q8N6N7	88 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	OR51L1	Q8NGJ5	315 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	DDIT4L	Q96D03	193 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	TMEM41A	Q96HV5	264 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	GNRHR2	Q96P88	292 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	ARHGAP9	Q9BRR9	750 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	TMPRSS13	Q9BYE2	586 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	MALT1	Q9UDY8	824 aa		13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZNF346	Q9UL40	294 aa	Known RBP	13.8	□□□□□ -0.2
DDX39A-209	ENST00000589318	PQLC2L	A1A4F0	135 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	LIPT2	A6NK58	231 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	CFD	P00746	253 aa	Predicted RBP	13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	MRPL3	P09001	348 aa	Known RBP	13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	ADH6	P28332	368 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	BTC	P35070	178 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	PITPNB	P48739	271 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	LINC01590	Q5TEZ4	76 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	C3orf33	Q6P1S2	294 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	BTN2A1	Q7KYR7	527 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	BVES	Q8NE79	360 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	OR52N1	Q8NH53	320 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	OR56B4	Q8NH76	319 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	SMAP2	Q8WU79	429 aa	Predicted RBP	13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	GATAD2B	Q8WXI9	593 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	YIPF5	Q969M3	257 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	TMEM203	Q969S6	136 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZMYND19	Q96E35	227 aa	Predicted RBP	13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	GRHPR	Q9UBQ7	328 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	FAM186A	A6NE01	2351 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	CNTRL	Q7Z7A1	2325 aa		13.79	□□□□□ -0.2
DDX39A-209	ENST00000589318	CEP250	Q9BV73	2442 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	MS4A18	H0YCH9	400 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	DCTN6	O00399	190 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZNF254	O75437	659 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	TF	P02787	698 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SHC1	P29353	583 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SLC25A1	P53007	311 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	FABP5	Q01469	135 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	OR7A5	Q15622	319 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	GSG1	Q2KHT4	349 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	MS4A18	Q3C1V0	323 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	IGF2-AS	Q6U949	168 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	JAZF1	Q86VZ6	243 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	FTMT	Q8N4E7	242 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	OR1J4	Q8NGS1	313 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	NEIL3	Q8TAT5	605 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZNF519	Q8TB69	540 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	SCARB1	Q8WTV0	552 aa		13.78	□□□□□ -0.2
DDX39A-209	ENST00000589318	ZBTB8A	Q96BR9	441 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms