RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 TMEM71Q6P5X7 295 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 DEGS2Q6QHC5 323 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF704Q6ZNC4 412 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-206ENST00000589117 H1FNTQ75WM6 255 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-206ENST00000589117 FAM109AQ8N4B1 249 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 C9orf62Q8N4C0 152 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF441Q8N8Z8 693 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 MFSD8Q8NHS3 518 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 ZNF519Q8TB69 540 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 STT3BQ8TCJ2 826 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 FOXRED1Q96CU9 486 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-206ENST00000589117 ORAI1Q96D31 301 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 GFI1Q99684 422 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 OR10A4Q9H209 315 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-206ENST00000589117 UBE2ZQ9H832 354 aaPredicted RBP6.65□□□□□ -1.34
ZNF540-206ENST00000589117 SERINC1Q9NRX5 453 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 B3GNT2Q9NY97 397 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 UPB1Q9UBR1 384 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 WNT16Q9UBV4 365 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 FBXL3Q9UKT7 428 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 NPIPA1Q9UND3 350 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 HEATR5AQ86XA9 2040 aa6.65□□□□□ -1.34
ZNF540-206ENST00000589117 A0A0A6YYH2 397 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 ANKUB1A6NFN9 424 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 GGT3PA6NGU5 568 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 A6NJ64 397 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PRR32B1ATL7 298 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SMLR1H3BR10 107 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SLC17A2O00624 439 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 AKR7A2O43488 359 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PLGP00747 810 aaPredicted RBP6.65□□□□□ -1.35
ZNF540-206ENST00000589117 CD3EP07766 207 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PNLIPP16233 465 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 RAB6AP20340 208 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PRSS3P35030 304 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 STARD6P59095 220 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 EIF2B1Q14232 305 aaKnown RBP6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PCGF3Q3KNV8 242 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 LAMTOR1Q6IAA8 161 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SLC25A25Q6KCM7 469 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 MTFR2Q6P444 385 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PRSS35Q8N3Z0 413 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SPICQ8N5J4 248 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 OR11G2Q8NGC1 345 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 OR2T35Q8NGX2 323 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 NUBPLQ8TB37 319 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 GPR137Q96N19 417 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 ELF4Q99607 663 aaPredicted RBP6.65□□□□□ -1.35
ZNF540-206ENST00000589117 CMKLR1Q99788 373 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 PTDSS2Q9BVG9 487 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SEMA4CQ9C0C4 833 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SLCO5A1Q9H2Y9 848 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 MRPL15Q9P015 296 aaKnown RBP6.65□□□□□ -1.35
ZNF540-206ENST00000589117 EIF3KQ9UBQ5 218 aaKnown RBP6.65□□□□□ -1.35
ZNF540-206ENST00000589117 HHLA2Q9UM44 414 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 SPEF1Q9Y4P9 236 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 KNL1Q8NG31 2342 aa6.65□□□□□ -1.35
ZNF540-206ENST00000589117 CEP290O15078 2479 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 THADAQ6YHU6 1953 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 TRAV8-7A0A075B6U6 113 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 A6NL46 340 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 C4orf47A7E2U8 309 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 H7C417 338 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 SULT1C2O00338 296 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 ZNF208O43345 1280 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 EIF4EBP3O60516 100 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-206ENST00000589117 GMDSO60547 372 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 AQP8O94778 261 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 NDUFB6O95139 128 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 TPOP07202 933 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 ADRB1P08588 477 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 ADRA2CP18825 462 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 CXCL3P19876 107 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 FKBP2P26885 142 aaKnown RBP6.64□□□□□ -1.35
ZNF540-206ENST00000589117 MAGEB1P43366 347 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 DNASE1L1P49184 302 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 VEGFCP49767 419 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 ZNF41P51814 821 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-206ENST00000589117 PER3P56645 1201 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 RAP2BP61225 183 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 DCDP81605 110 aaKnown RBP6.64□□□□□ -1.35
ZNF540-206ENST00000589117 GALK2Q01415 458 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 SMAD2Q15796 467 aaKnown RBP6.64□□□□□ -1.35
ZNF540-206ENST00000589117 ODF4Q2M2E3 257 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 WDR38Q5JTN6 314 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 PRAMEF17Q5VTA0 474 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 TMEM244Q5VVB8 128 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 C1QL3Q5VWW1 255 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 TEX261Q6UWH6 196 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 GLDNQ6ZMI3 551 aaPredicted RBP6.64□□□□□ -1.35
ZNF540-206ENST00000589117 SLC35D2Q76EJ3 337 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 HDDC2Q7Z4H3 204 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 SLC25A45Q8N413 288 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 BEST4Q8NFU0 473 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 OR8K3Q8NH51 312 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 OR52N5Q8NH56 324 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 FAM3DQ96BQ1 224 aa6.64□□□□□ -1.35
ZNF540-206ENST00000589117 RBP7Q96R05 134 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms