RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 ETV7Q9Y603 341 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 G3V3Q6 166 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ZFAND5O76080 213 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 TACSTD2P09758 323 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 PNMTP11086 282 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 PTH2RP49190 550 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 AP2S1P53680 142 aaPredicted RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 RIPPLY1Q0D2K3 151 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF74Q16587 644 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 KLHL26Q53HC5 615 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ACER2Q5QJU3 275 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ABHD17BQ5VST6 288 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FNDC7Q5VTL7 733 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 METTL11BQ5VVY1 283 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 LINC00696Q6ZRV3 163 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 JAZF1Q86VZ6 243 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ARMC10Q8N2F6 343 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF433Q8N7K0 673 aaPredicted RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 MAP6Q96JE9 813 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 Q96M85 177 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 OR10A5Q9H207 317 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 EIF3KQ9UBQ5 218 aaKnown RBP13.12□□□□□ -0.31
CCDC43-203ENST00000588210 FBXL3Q9UKT7 428 aa13.12□□□□□ -0.31
CCDC43-203ENST00000588210 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 CDK2AP1O14519 115 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 SHOXO15266 292 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 UPK3AO75631 287 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 CD14P08571 375 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 MAPK3P27361 379 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 GRPRP30550 384 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 Q499Y3 187 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 GPR139Q6DWJ6 353 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 SFRP4Q6FHJ7 346 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 SIGIRRQ6IA17 410 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ATG4DQ86TL0 474 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 RPS19BP1Q86WX3 136 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ZADH2Q8N4Q0 377 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF615Q8N8J6 731 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 SYNPRQ8TBG9 265 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 FCAMRQ8WWV6 532 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 GCDHQ92947 438 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 HAVCR1Q96D42 359 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 S100A16Q96FQ6 103 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 SLITRK2Q9H156 845 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 CDCP1Q9H5V8 836 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 MRPL15Q9P015 296 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 OR5V1Q9UGF6 321 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TRBV5-5A0A0J9YX44 114 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 PSMD9O00233 223 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TPPPO94811 219 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ABHD16AO95870 558 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TXNDC12O95881 172 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 CLPSP04118 112 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 OR8G3PP0DMU2 310 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 SDHAP31040 664 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ADH7P40394 386 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 AQP2P41181 271 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 VEGFCP49767 419 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF81P51508 661 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 RNF4P78317 190 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TOR2AQ5JU69 321 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TMEM69Q5SWH9 247 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 STAC2Q6ZMT1 411 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 NLRC3Q7RTR2 1065 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 OR6V1Q8N148 313 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ZNF321PQ8N8H1 164 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 OR5L2Q8NGL0 311 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 C15orf40Q8WUR7 153 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 NSMAFQ92636 917 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 HAS2Q92819 552 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 MIB2Q96AX9 1013 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 UTP23Q9BRU9 249 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TSPAN10Q9H1Z9 355 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 BEX1Q9HBH7 125 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 NPDC1Q9NQX5 325 aaPredicted RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 ABI3Q9P2A4 366 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 MRM2Q9UI43 246 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 FLVCR2Q9UPI3 526 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 KLHDC2Q9Y2U9 406 aa13.11□□□□□ -0.31
CCDC43-203ENST00000588210 TNRC6AQ8NDV7 1962 aaKnown RBP13.11□□□□□ -0.31
CCDC43-203ENST00000588210 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 TMEM72A0PK05 275 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 OR6C76A6NM76 312 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 ICMTO60725 284 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 KHDRBS3O75525 346 aaKnown RBP13.1□□□□□ -0.31
CCDC43-203ENST00000588210 IFNA7P01567 189 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 SELENOPP49908 381 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 P2RX1P51575 399 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 SLC37A1P57057 533 aa13.1□□□□□ -0.31
CCDC43-203ENST00000588210 SNTA1Q13424 505 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms