RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 RAB1BQ9H0U4 201 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 TBC1D23Q9NUY8 699 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 FZR1Q9UM11 496 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 TIMM10BQ9Y5J6 103 aa12.77□□□□□ -0.37
ATG4D-207ENST00000587256 ARFGEF3Q5TH69 2177 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 C5orf49A4QMS7 147 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 M0R233 179 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 GNGT2O14610 69 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 ARPC3O15145 178 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 F12P00748 615 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 HIST1H1CP16403 213 aaKnown RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 HOXB6P17509 224 aaKnown RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 CRABP1P29762 137 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 CDKN2AP42771 156 aaKnown RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 RASSF2P50749 326 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 BNIP1Q12981 228 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 CARTPTQ16568 116 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 MSMPQ1L6U9 139 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 MICAQ29983 383 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 ZNF770Q6IQ21 691 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 ZNF774Q6NX45 483 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 UGT2A3Q6UWM9 527 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 DNM1P46Q6ZS02 220 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 SDR9C7Q8NEX9 313 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 FAM168AQ92567 244 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 NMNAT3Q96T66 252 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 REG4Q9BYZ8 158 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 BCL2L14Q9BZR8 327 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 WNT5BQ9H1J7 359 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 DUSP13Q9UII6 198 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 POMPQ9Y244 141 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 COA3Q9Y2R0 106 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-207ENST00000587256 C2CD3Q4AC94 2353 aa12.76□□□□□ -0.37
ATG4D-207ENST00000587256 SYNGR3O43761 229 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 IDH3BO43837 385 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 DOK2O60496 412 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 E2F6O75461 281 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 GASTP01350 101 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 SCG5P05408 212 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 HEXAP06865 529 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 ADRA2AP08913 450 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 GSTM3P21266 225 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 RAD52P43351 418 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 ERFP50548 548 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 RIPPLY3P57055 190 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 SELENOVP59797 346 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 ERVS71-1P61550 626 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 AQP6Q13520 282 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 GK3PQ14409 553 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 SLC35F1Q5T1Q4 408 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 OTPQ5XKR4 325 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 RASSF6Q6ZTQ3 369 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 SYT9Q86SS6 491 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 MAPK1IP1LQ8NDC0 245 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 POM121L2Q96KW2 1035 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 TSSK2Q96PF2 358 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 SNX18Q96RF0 628 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 DOK1Q99704 481 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 WACQ9BTA9 647 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 CADM1Q9BY67 442 aaKnown RBP12.75□□□□□ -0.37
ATG4D-207ENST00000587256 PLA2G12AQ9BZM1 189 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 TPK1Q9H3S4 243 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 RPRD1BQ9NQG5 326 aaKnown RBP12.75□□□□□ -0.37
ATG4D-207ENST00000587256 ASH2LQ9UBL3 628 aa12.75□□□□□ -0.37
ATG4D-207ENST00000587256 EIF3KQ9UBQ5 218 aaKnown RBP12.75□□□□□ -0.37
ATG4D-207ENST00000587256 NDRG4Q9ULP0 352 aaKnown RBP12.75□□□□□ -0.37
ATG4D-207ENST00000587256 SETD2Q9BYW2 2564 aaPredicted RBP12.75□□□□□ -0.37
ATG4D-207ENST00000587256 LOC100509620A0A075B734 347 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 TMEM129A0AVI4 362 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 GSC2O15499 205 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 SGCEO43556 437 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 ATP5HO75947 161 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 SOX14O95416 240 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 LY6G6DO95868 133 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 SLC25A16P16260 332 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 PCSK6P29122 969 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 ALDH3B1P43353 468 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 HTR5AP47898 357 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 EVX1P49640 407 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 PDLIM4P50479 330 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 UCP2P55851 309 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 KLF3P57682 345 aaPredicted RBP12.74□□□□□ -0.37
ATG4D-207ENST00000587256 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATG4D-207ENST00000587256 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
ATG4D-207ENST00000587256 UNQ6126/PRO20091Q6UXV3 157 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 ZCCHC24Q8N2G6 241 aaKnown RBP12.74□□□□□ -0.37
ATG4D-207ENST00000587256 OR10H5Q8NGA6 315 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 OR52E2Q8NGJ4 325 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 OR8D4Q8NGM9 314 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 OR1J1Q8NGS3 322 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 ABHD4Q8TB40 342 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 SYNPRQ8TBG9 265 aa12.74□□□□□ -0.37
ATG4D-207ENST00000587256 C11orf40Q8WZ69 217 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms