RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 PHYHO14832 338 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 CYTIPO60759 359 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 CLPXO76031 633 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 VAMP5O95183 116 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 KRT8P05787 483 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 QDPRP09417 244 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 CLEC2LP0C7M8 214 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ZNF823P16415 610 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ZNF24P17028 368 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ALOX5APP20292 161 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 CDAP32320 146 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 CAPZA2P47755 286 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 BLVRAP53004 296 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 SH3BGRP55822 239 aaPredicted RBP9.01□□□□□ -0.97
APOC1-201ENST00000586638 SLC10A1Q14973 349 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 DGUOKQ16854 277 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 THEM4Q5T1C6 240 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 DMKNQ6E0U4 476 aaPredicted RBP9.01□□□□□ -0.97
APOC1-201ENST00000586638 SLC18B1Q6NT16 456 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 LRRN1Q6UXK5 716 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 GDPGP1Q6ZNW5 385 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.01□□□□□ -0.97
APOC1-201ENST00000586638 GLB1L2Q8IW92 636 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ZIC4Q8N9L1 334 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 OR10H5Q8NGA6 315 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 OR6N1Q8NGY5 312 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 NEIL3Q8TAT5 605 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 PRR7Q8TB68 274 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ABHD3Q8WU67 409 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 HSD17B8Q92506 261 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 TMEM54Q969K7 222 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 PGLYRP3Q96LB9 341 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 MYCBPQ99417 103 aaPredicted RBP9.01□□□□□ -0.97
APOC1-201ENST00000586638 TTYH2Q9BSA4 534 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 SF3B5Q9BWJ5 86 aaKnown RBP9.01□□□□□ -0.97
APOC1-201ENST00000586638 HDHD5Q9BXW7 423 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 MFRPQ9BY79 579 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ZDHHC11Q9H8X9 412 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 GLTPQ9NZD2 209 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 TMEM14AQ9Y6G1 99 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 PMF1-BGLAPU3KQ54 211 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 ARHGAP21Q5T5U3 1957 aa9.01□□□□□ -0.97
APOC1-201ENST00000586638 TRGV5A0A0B4J1U4 118 aa9□□□□□ -0.97
APOC1-201ENST00000586638 A0A1B0GTH9 108 aa9□□□□□ -0.97
APOC1-201ENST00000586638 TRDV1A0A1B0GX56 115 aa9□□□□□ -0.97
APOC1-201ENST00000586638 OGG1O15527 345 aa9□□□□□ -0.97
APOC1-201ENST00000586638 PLPP2O43688 288 aa9□□□□□ -0.97
APOC1-201ENST00000586638 UPK3AO75631 287 aa9□□□□□ -0.97
APOC1-201ENST00000586638 SYNGR4O95473 234 aa9□□□□□ -0.97
APOC1-201ENST00000586638 RNF224P0DH78 156 aa9□□□□□ -0.97
APOC1-201ENST00000586638 COL8A1P27658 744 aa9□□□□□ -0.97
APOC1-201ENST00000586638 LAP3P28838 519 aa9□□□□□ -0.97
APOC1-201ENST00000586638 NANOS3P60323 173 aaKnown RBP9□□□□□ -0.97
APOC1-201ENST00000586638 MXD1Q05195 221 aa9□□□□□ -0.97
APOC1-201ENST00000586638 RASGEF1BQ0VAM2 473 aa9□□□□□ -0.97
APOC1-201ENST00000586638 MRPL49Q13405 166 aaKnown RBP9□□□□□ -0.97
APOC1-201ENST00000586638 ZNF787Q6DD87 383 aa9□□□□□ -0.97
APOC1-201ENST00000586638 RPL22L1Q6P5R6 122 aaKnown RBP9□□□□□ -0.97
APOC1-201ENST00000586638 CD200R1LQ6Q8B3 271 aa9□□□□□ -0.97
APOC1-201ENST00000586638 CORO6Q6QEF8 472 aa9□□□□□ -0.97
APOC1-201ENST00000586638 TMEM91Q6ZNR0 172 aa9□□□□□ -0.97
APOC1-201ENST00000586638 DCXRQ7Z4W1 244 aa9□□□□□ -0.97
APOC1-201ENST00000586638 OR52N5Q8NH56 324 aa9□□□□□ -0.97
APOC1-201ENST00000586638 ASB17Q8WXJ9 295 aa9□□□□□ -0.97
APOC1-201ENST00000586638 RNF166Q96A37 237 aaPredicted RBP9□□□□□ -0.97
APOC1-201ENST00000586638 PNPLA2Q96AD5 504 aa9□□□□□ -0.97
APOC1-201ENST00000586638 ALKBH3Q96Q83 286 aaPredicted RBP9□□□□□ -0.97
APOC1-201ENST00000586638 OR8B4Q96RC9 309 aa9□□□□□ -0.97
APOC1-201ENST00000586638 ABHD6Q9BV23 337 aa9□□□□□ -0.97
APOC1-201ENST00000586638 ULBP2Q9BZM5 246 aa9□□□□□ -0.97
APOC1-201ENST00000586638 SLIRPQ9GZT3 109 aaKnown RBP9□□□□□ -0.97
APOC1-201ENST00000586638 SEC61A2Q9H9S3 476 aa9□□□□□ -0.97
APOC1-201ENST00000586638 ACKR4Q9NPB9 350 aa9□□□□□ -0.97
APOC1-201ENST00000586638 TIGARQ9NQ88 270 aa9□□□□□ -0.97
APOC1-201ENST00000586638 FOXD3Q9UJU5 478 aaPredicted RBP9□□□□□ -0.97
APOC1-201ENST00000586638 CAMK2AQ9UQM7 478 aa9□□□□□ -0.97
APOC1-201ENST00000586638 UGT2A1Q9Y4X1 527 aa9□□□□□ -0.97
APOC1-201ENST00000586638 SETD2Q9BYW2 2564 aaPredicted RBP9□□□□□ -0.97
APOC1-201ENST00000586638 CACNA1CQ13936 2221 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 SHISA3A0PJX4 238 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 CENPBD1B2RD01 187 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 ZNF432O94892 652 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 CDRT1O95170 752 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 ACTL6AO96019 429 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 HLA-DPB1P04440 258 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 NR2C1P13056 603 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 KIR3DL2P43630 455 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 TGM4P49221 684 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 SIRPAP78324 504 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 EGR3Q06889 387 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 MFGE8Q08431 387 aaPredicted RBP8.99□□□□□ -0.97
APOC1-201ENST00000586638 GPR50Q13585 617 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 ZNF169Q14929 603 aaPredicted RBP8.99□□□□□ -0.97
APOC1-201ENST00000586638 HIST3H3Q16695 136 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 C10orf128Q5T292 105 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 FAM27D1Q5T7N8 215 aa8.99□□□□□ -0.97
APOC1-201ENST00000586638 LIPNQ5VXI9 398 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms