RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 HIST3H3Q16695 136 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 ACSM3Q53FZ2 586 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 LIPNQ5VXI9 398 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SLC25A47Q6Q0C1 308 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 UNQ9370/PRO34162Q6UXP9 181 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 CEACAM19Q7Z692 300 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 KRT77Q7Z794 578 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SLC22A16Q86VW1 577 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SYT14Q8NB59 555 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 NOXO1Q8NFA2 376 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 CPT1CQ8TCG5 803 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 SMAP2Q8WU79 429 aaPredicted RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 CPNE4Q96A23 557 aaPredicted RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 PGLYRP3Q96LB9 341 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 CEP19Q96LK0 163 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 MROQ9BYG7 248 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 C6orf62Q9GZU0 229 aaPredicted RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 ACKR4Q9NPB9 350 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 MRPL22Q9NWU5 206 aaKnown RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 MRM2Q9UI43 246 aaKnown RBP9.24□□□□□ -0.93
LIG3-203ENST00000585370 IKZF2Q9UKS7 526 aa9.24□□□□□ -0.93
LIG3-203ENST00000585370 PCSK5Q92824 1860 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ANKRD61A6NGH8 418 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 CD8B2A6NJW9 211 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 TMEM212A6NML5 194 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ZNF879B4DU55 563 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 LOC110117498-PIK3R3F6TDL0 507 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ACOT7O00154 380 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 EIF1AYO14602 144 aaKnown RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 TNFSF11O14788 317 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 UPK3AO75631 287 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 GLSO94925 669 aaPredicted RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 ABHD16AO95870 558 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ACTL6AO96019 429 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 SPARCP09486 303 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 CD8BP10966 210 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 DCTDP32321 178 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 RIDAP52758 137 aaKnown RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 CLDN17P56750 224 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ARG2P78540 354 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 CAMK2DQ13557 499 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 EIF2B1Q14232 305 aaKnown RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 SLC10A1Q14973 349 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 C4orf17Q53FE4 359 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 SPANXN2Q5MJ10 180 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 HIST2H2BCQ6DN03 193 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 C16orf87Q6PH81 154 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 LYPD4Q6UWN0 246 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 IGFL2Q6UWQ7 119 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 MEIOBQ8N635 442 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ZFP62Q8NB50 900 aaPredicted RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 GALNT11Q8NCW6 608 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 OR9K2Q8NGE7 335 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 OR5AK2Q8NH90 309 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 RNF128Q8TEB7 428 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 NSMAFQ92636 917 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 TMEM54Q969K7 222 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 SCMH1Q96GD3 660 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ADGRG7Q96K78 797 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 WDFY2Q96P53 400 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 EMC6Q9BV81 110 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 TTTY12Q9BZ98 90 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 COMMD4Q9H0A8 199 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.23□□□□□ -0.93
LIG3-203ENST00000585370 ZNF552Q9H707 407 aaPredicted RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 ZNF703Q9H7S9 590 aaPredicted RBP9.23□□□□□ -0.93
LIG3-203ENST00000585370 NIPAL2Q9H841 368 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ELOVL3Q9HB03 270 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ACOXLQ9NUZ1 547 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 PLA2G3Q9NZ20 509 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 GLTPQ9NZD2 209 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 RCE1Q9Y256 329 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 EML6Q6ZMW3 1958 aa9.23□□□□□ -0.93
LIG3-203ENST00000585370 DOCK10Q96BY6 2186 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 MYO9AB2RTY4 2548 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 PINLYPA6NC86 204 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 A6NL46 340 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 ZNF814B7Z6K7 855 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 PDCD5O14737 125 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 RAF1P04049 648 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 QDPRP09417 244 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 UCHL1P09936 223 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 RNF224P0DH78 156 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 OR8G3PP0DMU2 310 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 ZNF12P17014 697 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 CSNK1A1P48729 337 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 MEOX1P50221 254 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 PSMD7P51665 324 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 LSM6P62312 80 aaKnown RBP9.22□□□□□ -0.93
LIG3-203ENST00000585370 PPIAP62937 165 aaKnown RBP9.22□□□□□ -0.93
LIG3-203ENST00000585370 HNRNPA0Q13151 305 aaKnown RBP9.22□□□□□ -0.93
LIG3-203ENST00000585370 ETFDHQ16134 617 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 MEP1BQ16820 701 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 ZMAT1Q5H9K5 638 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 ZNF766Q5HY98 468 aa9.22□□□□□ -0.93
LIG3-203ENST00000585370 C10orf128Q5T292 105 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms