RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472	APH1B	Q8WW43	257 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	NABP1	Q96AH0	204 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	ZNF582	Q96NG8	517 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	FOXN4	Q96NZ1	517 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	NELFA	Q9H3P2	528 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	DNAJC27	Q9NZQ0	273 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	H2AFY2	Q9P0M6	372 aa	Predicted RBP	13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MOK	Q9UQ07	419 aa		13.96	□□□□□ -0.17
CSNK1D-223	ENST00000584472	MTOR	P42345	2549 aa		13.96	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	GAA	P10253	952 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NPR2	P20594	1047 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MYF6	P23409	242 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	LOX	P28300	417 aa	Predicted RBP	13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CENPA	P49450	140 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MRPS34	P82930	218 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	APOF	Q13790	326 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	NRN1L	Q496H8	165 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MEDAG	Q5VYS4	303 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ANKRD16	Q6P6B7	361 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF813	Q6ZN06	617 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MEPCE	Q7L2J0	689 aa	Known RBP	13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	THAP5	Q7Z6K1	395 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	GID4	Q8IVV7	300 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SLC26A10	Q8NG04	563 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	OR6K6	Q8NGW6	343 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	FBLIM1	Q8WUP2	373 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HTRA1	Q92743	480 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PIK3IP1	Q96FE7	263 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TEAD3	Q99594	435 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SEC61A2	Q9H9S3	476 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	OBP2B	Q9NPH6	170 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	POLE4	Q9NR33	117 aa		13.95	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MED13L	Q71F56	2210 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CCDC182	A6NF36	153 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ENTPD6	O75354	484 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	WBP4	O75554	376 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MPZL1	O95297	269 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SCG5	P05408	212 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	B4GALT1	P15291	398 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HOXC12	P31275	282 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	FMO3	P31513	532 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	GUCA1A	P43080	201 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ART1	P52961	327 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	BLVRA	P53004	296 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CDH11	P55287	796 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	RPS7	P62081	194 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HSF2	Q03933	536 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	KCNMB1	Q16558	191 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	KLHL24	Q6TFL4	600 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	LYPD4	Q6UWN0	246 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SLC22A24	Q8N4F4	322 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CNIH3	Q8TBE1	160 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	C11orf40	Q8WZ69	217 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	BCL2L2	Q92843	193 aa	Predicted RBP	13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	RFK	Q969G6	155 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PLPPR2	Q96GM1	343 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472		Q96MT0	163 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ESRP2	Q9H6T0	727 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PLEKHF2	Q9H8W4	249 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SIAE	Q9HAT2	523 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SLC17A5	Q9NRA2	495 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MRPL22	Q9NWU5	206 aa	Known RBP	13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CLN6	Q9NWW5	311 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	AMDHD2	Q9Y303	409 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SLC25A15	Q9Y619	301 aa		13.94	□□□□□ -0.18
CSNK1D-223	ENST00000584472	C2CD3	Q4AC94	2353 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CAD	P27708	2225 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472		A0A096LPE4	126 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472		A0A1W2PPZ6	126 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SLC22A31	A6NKX4	558 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	DENR	O43583	198 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HLA-DQA2	P01906	255 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TF	P02787	698 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	OR8G3P	P0DMU2	310 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HOXB1	P14653	301 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MSR1	P21757	451 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PAX7	P23759	505 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	GSTT1	P30711	240 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HTR1F	P30939	366 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TEK	Q02763	1124 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CDK5R2	Q13319	367 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	SGCA	Q16586	387 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TBRG1	Q3YBR2	411 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HIKESHI	Q53FT3	197 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	LCN1P1	Q5VSP4	162 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	FAM27B	Q5VT28	67 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ALKBH2	Q6NS38	261 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	UGT2A3	Q6UWM9	527 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PAMR1	Q6UXH9	720 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	B3GLCT	Q6Y288	498 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZNF511	Q8NB15	262 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	ZMYND19	Q96E35	227 aa	Predicted RBP	13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	CNBD2	Q96M20	576 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	HS3ST6	Q96QI5	342 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	TMEM204	Q9BSN7	226 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472		Q9H521	79 aa		13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	MOV10	Q9HCE1	1003 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	WARS2	Q9UGM6	360 aa	Known RBP	13.93	□□□□□ -0.18
CSNK1D-223	ENST00000584472	PLCE1	Q9P212	2302 aa		13.93	□□□□□ -0.18

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