RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 YIPF5Q969M3 257 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 URM1Q9BTM9 101 aaKnown RBP10.79□□□□□ -0.68
ERBB2-218ENST00000584450 LAT2Q9GZY6 243 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 APMAPQ9HDC9 416 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 TREM1Q9NP99 234 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 MRM2Q9UI43 246 aaKnown RBP10.79□□□□□ -0.68
ERBB2-218ENST00000584450 RGS11O94810 467 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 NUDT1P36639 197 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 FOXF1Q12946 379 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 SMRP1Q8NCR6 262 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 PTPMT1Q8WUK0 201 aaPredicted RBP10.79□□□□□ -0.68
ERBB2-218ENST00000584450 ZBTB8AQ96BR9 441 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 CMBLQ96DG6 245 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 SFXN2Q96NB2 322 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 KLHDC2Q9Y2U9 406 aa10.79□□□□□ -0.68
ERBB2-218ENST00000584450 TRAV8-7A0A075B6U6 113 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 GPR171O14626 319 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ARPC3O15145 178 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PTP4A3O75365 173 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 HPXP02790 462 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 CSNK1A1P48729 337 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 SLC17A1Q14916 467 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 SWI5Q1ZZU3 235 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 SMIM4Q8WVI0 70 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ZNRF4Q8WWF5 429 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ASB17Q8WXJ9 295 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 MNTQ99583 582 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 MARVELD1Q9BSK0 173 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 KCNN3Q9UGI6 736 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PLXND1Q9Y4D7 1925 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ZNF850A8MQ14 1090 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PRAF2O60831 178 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PMP2P02689 132 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PRH1P02810 166 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 P04436 131 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 HOXB5P09067 269 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 HLA-DOBP13765 273 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 GLB1P16278 677 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 NFYAP23511 347 aaPredicted RBP10.78□□□□□ -0.68
ERBB2-218ENST00000584450 DPP4P27487 766 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 RFC3P40938 356 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 BTG1P62324 171 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 NR0B2Q15466 257 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ZNF141Q15928 474 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ZNF687Q8N1G0 1237 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PIGTQ969N2 578 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 MIB2Q96AX9 1013 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 C12orf4Q9NQ89 552 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 FRRS1LQ9P0K9 344 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 A0A087WV48 116 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 NSG1A0A0A6YYJ2 146 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 BLACEA4D250 179 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 TGFBR3LH3BV60 316 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PYCARD-AS1I3L0S3 204 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 AGPAT2O15120 278 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 SLC37A1P57057 533 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PMPCAQ10713 525 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 C3orf33Q6P1S2 294 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 C7orf50Q9BRJ6 194 aaKnown RBP10.78□□□□□ -0.68
ERBB2-218ENST00000584450 PISDQ9UG56 409 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 ZMIZ1Q9ULJ6 1067 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 SLC5A6Q9Y289 635 aa10.78□□□□□ -0.68
ERBB2-218ENST00000584450 EIF4E2O60573 245 aaKnown RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 HOXC4P09017 264 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 BDKRB2P30411 391 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 ZNF84P51523 738 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 EBPQ15125 230 aaKnown RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 MESTQ5EB52 335 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 CD276Q5ZPR3 534 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 DND1Q8IYX4 353 aaKnown RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 STEAP2Q8NFT2 490 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 OR4C16Q8NGL9 310 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 HOXB13Q92826 284 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 ULBP2Q9BZM5 246 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 SMOC1Q9H4F8 434 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 SLC22A11Q9NSA0 550 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 MRPS18AQ9NVS2 196 aaKnown RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 CACNA1DQ01668 2161 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 LOC100289279A0A1B0GTE1 492 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 CIB4A0PJX0 185 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 FRG2CA6NGY1 282 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 CRYZL1O95825 349 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 TRAPPC2P0DI81 140 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 TRAPPC2BP0DI82 140 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 SMIM10L1P0DMW3 83 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 SLC6A1P30531 599 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 ZNF93P35789 620 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 TAS2R19P59542 299 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 INPP5JQ15735 1006 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 LYPD8Q6UX82 237 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 FAM109AQ8N4B1 249 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 ZNF680Q8NEM1 530 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 OR10G3Q8NGC4 313 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 OR1N1Q8NGS0 311 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 SMIM10Q96HG1 83 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 SLC19A3Q9BZV2 496 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 MN1Q10571 1320 aaPredicted RBP10.77□□□□□ -0.69
ERBB2-218ENST00000584450 FREM3P0C091 2139 aa10.77□□□□□ -0.69
ERBB2-218ENST00000584450 TRAV1-2A0A0B4J238 106 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms