RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TMEM38BQ9NVV0 291 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 THAP1Q9NVV9 213 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 GLTPQ9NZD2 209 aa6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 V9GYY5 206 aaPredicted RBP6.62□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC22A23A1A5C7 686 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 CLDN25C9JDP6 229 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 H3BS24 57 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 J3QLI3 93 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 DHHO43323 396 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 PRSS23O95084 383 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 FARS2O95363 451 aaKnown RBP6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 FSHBP01225 129 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 OR8G3PP0DMU2 310 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF250P15622 560 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 MAKP20794 623 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 CRYBB2P43320 205 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SELENOVP59797 346 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SCARB2Q14108 478 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 TBC1D28Q2M2D7 210 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 PCGF3Q3KNV8 242 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM255AQ5JRV8 349 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 PRR31Q5SQ13 230 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 REEP3Q6NUK4 255 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 WDR93Q6P2C0 686 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM53Q6P2H8 277 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC16A14Q7RTX9 510 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 RANBP3LQ86VV4 465 aaPredicted RBP6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 KRT73Q86Y46 540 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 OR4K5Q8NGD3 323 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 OR6X1Q8NH79 312 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF519Q8TB69 540 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 NANPQ8TBE9 248 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 GAL3ST1Q99999 423 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM43Q9BTV4 400 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SPATA5L1Q9BVQ7 753 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 C1QTNF5Q9BXJ0 243 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 IKZF5Q9H5V7 419 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SAP30LQ9HAJ7 183 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 TCF7L2Q9NQB0 619 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 DECR2Q9NUI1 292 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SLCO1C1Q9NYB5 712 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 NKIRAS2Q9NYR9 191 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 VAPAQ9P0L0 249 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 SLAMF8Q9P0V8 285 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 OPN4Q9UHM6 478 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 GPR160Q9UJ42 338 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 DOCK11Q5JSL3 2073 aa6.61□□□□□ -1.35
SMCHD1-210ENST00000583800 CMYA5Q8N3K9 4069 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 A0A087X0M5 115 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 A0A1B0GX30 115 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 TCRBV5S2A0A599 114 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 TMEM120BA0PK00 339 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 ISPDA4D126 451 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 AQP12BA6NM10 295 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 CPSF4LA6NMK7 179 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 KPNA4O00629 521 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 RNF13O43567 381 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 SPRY3O43610 288 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 OR6A2O95222 327 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 SNAP29O95721 258 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 MPIG6BO95866 241 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 CH25HO95992 272 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 MT-ATP6P00846 226 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 IGHV1-46P01743 117 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 OPN1SWP03999 348 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 THY1P04216 161 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 QDPRP09417 244 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 PGA4P0DJD7 388 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 PGA3P0DJD8 388 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 DRD4P21917 467 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 FUT4P22083 530 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 RBMXP38159 391 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 UCP2P55851 309 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 LCN2P80188 198 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 NPTX1Q15818 432 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF74Q16587 644 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 HFEQ30201 348 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC36A2Q495M3 483 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 MMEL1Q495T6 779 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 PAGE3Q5JUK9 113 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 SPATA46Q5T0L3 261 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 LRIF1Q5T3J3 769 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 LRRC18Q8N456 261 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 LRRC17Q8N6Y2 441 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 SMYD1Q8NB12 490 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 RBM15BQ8NDT2 890 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 OR1J1Q8NGS3 322 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 IPCEF1Q8WWN9 437 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 C11orf40Q8WZ69 217 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 TIMD4Q96H15 378 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 SLC25A44Q96H78 314 aaPredicted RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 DUX5Q96PT3 197 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF347Q96SE7 839 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 MCHR1Q99705 422 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 NUDT16L1Q9BRJ7 211 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 ZNF747Q9BV97 191 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 BCL2L14Q9BZR8 327 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 C1orf198Q9H425 327 aa6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
SMCHD1-210ENST00000583800 TAS2R5Q9NYW4 299 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms