RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TLE3Q04726 772 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 CPEB2Q7Z5Q1 589 aaKnown RBP12.28□□□□□ -0.44
SRSF1-205ENST00000582730 MISPQ8IVT2 679 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 OR6M1Q8NGM8 313 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 OR5M1Q8NGP8 315 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 STK35Q8TDR2 534 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
SRSF1-205ENST00000582730 C4orf45Q96LM5 186 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 DCBLD2Q96PD2 775 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 MNTQ99583 582 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 MS4A7Q9GZW8 240 aaPredicted RBP12.28□□□□□ -0.44
SRSF1-205ENST00000582730 COPZ2Q9P299 210 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 RCE1Q9Y256 329 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 U3KQA8 63 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 IGLV3-12A0A075B6K2 115 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 ANKUB1A6NFN9 424 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 WNT11O96014 354 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 FREM3P0C091 2139 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 DPP4P27487 766 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 KIR3DL2P43630 455 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 TSPAN5P62079 268 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 GLO1Q04760 184 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 RASGEF1BQ0VAM2 473 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 OPCMLQ14982 345 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 INPP5JQ15735 1006 aaPredicted RBP12.28□□□□□ -0.44
SRSF1-205ENST00000582730 HACD4Q5VWC8 232 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 SFRP4Q6FHJ7 346 aaPredicted RBP12.28□□□□□ -0.44
SRSF1-205ENST00000582730 BAIAP2L2Q6UXY1 529 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 CFAP77Q6ZQR2 320 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 BTN2A1Q7KYR7 527 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 FGD2Q7Z6J4 655 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 LINC00346Q8IVM7 164 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 OR10G3Q8NGC4 313 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 OR52I2Q8NH67 350 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 SEMA4CQ9C0C4 833 aa12.28□□□□□ -0.44
SRSF1-205ENST00000582730 COL5A1P20908 1838 aaPredicted RBP12.27□□□□□ -0.44
SRSF1-205ENST00000582730 VSTM2BA6NLU5 285 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 EIF1AYO14602 144 aaKnown RBP12.27□□□□□ -0.44
SRSF1-205ENST00000582730 NUP62P37198 522 aaPredicted RBP12.27□□□□□ -0.44
SRSF1-205ENST00000582730 ZNF41P51814 821 aaPredicted RBP12.27□□□□□ -0.44
SRSF1-205ENST00000582730 BLVRAP53004 296 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 RPS15P62841 145 aaKnown RBP12.27□□□□□ -0.44
SRSF1-205ENST00000582730 SQSTM1Q13501 440 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 SLC17A1Q14916 467 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 PMS2CLQ68D20 193 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 OR5L2Q8NGL0 311 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 SMIM4Q8WVI0 70 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 SFXN2Q96NB2 322 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 EMC6Q9BV81 110 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 MFRPQ9BY79 579 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 KIF25Q9UIL4 384 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 CDV3Q9UKY7 258 aaKnown RBP12.27□□□□□ -0.44
SRSF1-205ENST00000582730 HRH3Q9Y5N1 445 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 NPTNQ9Y639 398 aa12.27□□□□□ -0.44
SRSF1-205ENST00000582730 IGLV1-36A0A0B4J1U3 117 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 PATE3B3GLJ2 98 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 NUPL2O15504 423 aaKnown RBP12.27□□□□□ -0.45
SRSF1-205ENST00000582730 ZNF254O75437 659 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 RGS11O94810 467 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 ZNF823P16415 610 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 EIF1AXP47813 144 aaKnown RBP12.27□□□□□ -0.45
SRSF1-205ENST00000582730 NHLRC3Q5JS37 347 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 NUBPLQ8TB37 319 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 IFI44Q8TCB0 444 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 HAVCR2Q8TDQ0 301 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 WDR77Q9BQA1 342 aaPredicted RBP12.27□□□□□ -0.45
SRSF1-205ENST00000582730 CHIAQ9BZP6 476 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 SHARPINQ9H0F6 387 aa12.27□□□□□ -0.45
SRSF1-205ENST00000582730 TRBV5-5A0A0J9YX44 114 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ZFAND5O76080 213 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 PNPP00491 289 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 TMIGD3P0DMS9 266 aaPredicted RBP12.26□□□□□ -0.45
SRSF1-205ENST00000582730 RIDAP52758 137 aaKnown RBP12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ART1P52961 327 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 MFGE8Q08431 387 aaPredicted RBP12.26□□□□□ -0.45
SRSF1-205ENST00000582730 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ZNF227Q86WZ6 799 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ZNF679Q8IYX0 411 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 OR56B4Q8NH76 319 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ST8SIA1Q92185 356 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 EDAQ92838 391 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 SPSB2Q99619 263 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 GAL3ST1Q99999 423 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ABHD6Q9BV23 337 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 KLK11Q9UBX7 282 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ADAMTS20P59510 1910 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 MFSD2BA6NFX1 497 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ADAM10O14672 748 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ZNF432O94892 652 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 FCER2P06734 321 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 CDK2P24941 298 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 RAG2P55895 527 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 ZNF273Q14593 569 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 NDUFAF7Q7L592 441 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 UXS1Q8NBZ7 420 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 OR52H1Q8NGJ2 320 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 DDIT4LQ96D03 193 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 DEFB126Q9BYW3 111 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 CENPMQ9NSP4 180 aa12.26□□□□□ -0.45
SRSF1-205ENST00000582730 VSX1Q9NZR4 365 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms