RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 SPTBN4Q9H254 2564 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 LOC101059948A0A1B0GTJ6 334 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 GJE1A6NN92 205 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 CALCBP10092 127 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 RTP5Q14D33 572 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 ZNF57Q68EA5 555 aaPredicted RBP20.21■□□□□ 0.83
CCDC47-204ENST00000582252 OR5H6Q8NGV6 325 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 HPS1Q92902 700 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 PIGQQ9BRB3 760 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 EMC6Q9BV81 110 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 RBFOX1Q9NWB1 397 aaKnown RBP20.21■□□□□ 0.83
CCDC47-204ENST00000582252 R4GMQ9 66 aa20.21■□□□□ 0.83
CCDC47-204ENST00000582252 A0A1B0GTH9 108 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 TRABD2BA6NFA1 517 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 ANXA2P2A6NMY6 339 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 ZNF726A6NNF4 738 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 PLA2G10O15496 165 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 TRAF3IP2O43734 574 aaPredicted RBP20.2■□□□□ 0.82
CCDC47-204ENST00000582252 OPN1LWP04000 364 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 ANXA2P07355 339 aaKnown RBP20.2■□□□□ 0.82
CCDC47-204ENST00000582252 LAP3P28838 519 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 CSNK2A1P68400 391 aaPredicted RBP20.2■□□□□ 0.82
CCDC47-204ENST00000582252 C19orf57Q0VDD7 668 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 OR7E24Q6IFN5 339 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 DCXRQ7Z4W1 244 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 LGALS14Q8TCE9 139 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 TMEM106AQ96A25 262 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 GNRHR2Q96P88 292 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 NEDD4LQ96PU5 975 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 P4HTMQ9NXG6 502 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 GTF2A1LQ9UNN4 478 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 CAMK2AQ9UQM7 478 aa20.2■□□□□ 0.82
CCDC47-204ENST00000582252 LYRM1O43325 122 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 SLC43A1O75387 559 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 VAMP5O95183 116 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 MPZL1O95297 269 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 PGA4P0DJD7 388 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 PGA3P0DJD8 388 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 SCAND1P57086 179 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 FOXK1P85037 733 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 CAMK2BQ13554 666 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 HES5Q5TA89 166 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 AGAP6Q5VW22 663 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 SPATC1Q76KD6 591 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 CATSPERDQ86XM0 798 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.19■□□□□ 0.82
CCDC47-204ENST00000582252 RDH10Q8IZV5 341 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 AGAP4Q96P64 663 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 THAP7Q9BT49 309 aaPredicted RBP20.19■□□□□ 0.82
CCDC47-204ENST00000582252 ETV7Q9Y603 341 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 DOCK10Q96BY6 2186 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 CD2P06729 351 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 LIPCP11150 499 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 JMJD6Q6NYC1 403 aaPredicted RBP20.19■□□□□ 0.82
CCDC47-204ENST00000582252 PLET1Q6UQ28 207 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 ST7LQ8TDW4 575 aa20.19■□□□□ 0.82
CCDC47-204ENST00000582252 PCDHGA9Q9Y5G4 932 aaKnown RBP20.19■□□□□ 0.82
CCDC47-204ENST00000582252 OR2M5A3KFT3 312 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 H2BFMP0C1H6 154 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 SRD5A2P31213 254 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 RAC1P63000 192 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 Q0VFX4 171 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 CAMK2DQ13557 499 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 ACER2Q5QJU3 275 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 OTPQ5XKR4 325 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 ZNF704Q6ZNC4 412 aaPredicted RBP20.18■□□□□ 0.82
CCDC47-204ENST00000582252 LRRTM1Q86UE6 522 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 UBQLNLQ8IYU4 475 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 C11orf40Q8WZ69 217 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 MCHR2Q969V1 340 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 GFI1Q99684 422 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 DHDHQ9UQ10 334 aa20.18■□□□□ 0.82
CCDC47-204ENST00000582252 FREM3P0C091 2139 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 IGKV1D-43A0A0B4J1Z2 117 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 A0A1W2PPL8 197 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 ZIC3O60481 467 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 MAGEB1P43366 347 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 MMP15P51511 669 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 ZNF227Q86WZ6 799 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 RNF133Q8WVZ7 376 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 RAB40AQ8WXH6 277 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 ORAI1Q96D31 301 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 C1orf198Q9H425 327 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 LIN7BQ9HAP6 207 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 CKLFQ9UBR5 152 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 DCHS1Q96JQ0 3298 aa20.17■□□□□ 0.82
CCDC47-204ENST00000582252 FAM240BA0A1B0GVZ2 78 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 G3V3Y1 287 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 CTDSPLO15194 276 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 DNPH1O43598 174 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 DCTDP32321 178 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 ODF4Q2M2E3 257 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 ZNF468Q5VIY5 522 aaPredicted RBP20.16■□□□□ 0.82
CCDC47-204ENST00000582252 KLHL24Q6TFL4 600 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 LINC00346Q8IVM7 164 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 WDFY1Q8IWB7 410 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 DUSP18Q8NEJ0 188 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 KCNE4Q8WWG9 221 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 RNF121Q9H920 327 aa20.16■□□□□ 0.82
CCDC47-204ENST00000582252 CLEC4AQ9UMR7 237 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms