RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SLC2A3P11169 496 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 SSR4P51571 173 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 PRSS8Q16651 343 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 PRAMEF5Q5TYX0 476 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 PRAMEF6Q5VXH4 476 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 UBE2J2Q8N2K1 259 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 LIX1Q8N485 282 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 MS4A15Q8N5U1 240 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 OR10J6PQ8NGY7 276 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 SERPINB12Q96P63 405 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 TMED5Q9Y3A6 229 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 IKBKGQ9Y6K9 419 aa2.43□□□□□ -2.02
SMCHD1-204ENST00000581226 PIKFYVEQ9Y2I7 2098 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 NSD2O96028 1365 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 CDC7O00311 574 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 MRPS12O15235 138 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 RRP8O43159 456 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 EEDO75530 441 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 DCNP07585 359 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 CCNB1P14635 433 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 ZNF43P17038 809 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 NCF2P19878 526 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 RAB3BP20337 219 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 AQP2P41181 271 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 PON2Q15165 354 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 SF3A2Q15428 464 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 KRTAP13-2Q52LG2 175 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 KPRPQ5T749 579 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 PLET1Q6UQ28 207 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 BHLHA15Q7RTS1 189 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 FAM228AQ86W67 206 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 OR56B2PQ8NGI1 322 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 OR52P1PQ8NH57 321 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 COQ8AQ8NI60 647 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 RAB3IL1Q8TBN0 382 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 GPR151Q8TDV0 419 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 NEURL3Q96EH8 262 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 L3HYPDHQ96EM0 354 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 NARS2Q96I59 477 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 PKNOX2Q96KN3 472 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 RNF157Q96PX1 679 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 NMRK1Q9NWW6 199 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 MARCOQ9UEW3 520 aaPredicted RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 LSM7Q9UK45 103 aaKnown RBP2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 ST3GAL6Q9Y274 331 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 GOLT1BQ9Y3E0 138 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 ADAMTS13Q76LX8 1427 aa2.42□□□□□ -2.02
SMCHD1-204ENST00000581226 OR2AG2A6NM03 316 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 H0Y8G0 127 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 RPL36A-HNRNPH2H7BZ11 118 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 ZNF207O43670 478 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 POLR2MP0CAP2 368 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 ZNF250P15622 560 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 CCNHP51946 323 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 PRMT2P55345 433 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 CACNG7P62955 275 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 MXD1Q05195 221 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 IDI1Q13907 227 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 SNRNP35Q16560 246 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 VPS26BQ4G0F5 336 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 SMUG1Q53HV7 270 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 METTL21CQ5VZV1 264 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 MYOCDQ8IZQ8 938 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 SPATA4Q8NEY3 305 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 B3GNT7Q8NFL0 401 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 C15orf40Q8WUR7 153 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 CCDC126Q96EE4 140 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 FOXC2Q99958 501 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 OSBPL11Q9BXB4 747 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 ULBP2Q9BZM5 246 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 SAV1Q9H4B6 383 aaPredicted RBP2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 DDX19AQ9NUU7 478 aaKnown RBP2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 WIF1Q9Y5W5 379 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 PTPRTO14522 1441 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 MAPK8IP3Q9UPT6 1336 aa2.41□□□□□ -2.02
SMCHD1-204ENST00000581226 GOLGA8OA6NCC3 632 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 GOLGA8NF8WBI6 632 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 TSPAN13O95857 204 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 NDUFB10O96000 172 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 CELP19835 753 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 CHMLP26374 656 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 IRF4Q15306 451 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 FBXW12Q6X9E4 464 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 NIPA1Q7RTP0 329 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 TAS2R42Q7RTR8 314 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 CALHM1Q8IU99 346 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 MMAAQ8IVH4 418 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 NECAB1Q8N987 351 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 NECAP1Q8NC96 275 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 ZNF502Q8TBZ5 544 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 SLC7A13Q8TCU3 470 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 SLC2A14Q8TDB8 520 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 PHF10Q8WUB8 498 aaKnown RBP2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 TPD52L3Q96J77 140 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 ATP5SQ99766 215 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 SPNS1Q9H2V7 528 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 ANKRA2Q9H9E1 313 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 SLC2A8Q9NY64 477 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 TNS2Q63HR2 1409 aa2.4□□□□□ -2.03
SMCHD1-204ENST00000581226 IGLV3-12A0A075B6K2 115 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms