RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 SNRPD2P62316 118 aaKnown RBP17.31■□□□□ 0.36
SS18-218ENST00000581021 ZNF362Q5T0B9 420 aaPredicted RBP17.31■□□□□ 0.36
SS18-218ENST00000581021 GLB1L2Q8IW92 636 aa17.31■□□□□ 0.36
SS18-218ENST00000581021 ZNF525Q8N782 197 aa17.31■□□□□ 0.36
SS18-218ENST00000581021 PAPD5Q8NDF8 572 aaKnown RBP17.31■□□□□ 0.36
SS18-218ENST00000581021 SDR9C7Q8NEX9 313 aa17.31■□□□□ 0.36
SS18-218ENST00000581021 OR4Q3Q8NH05 313 aa17.31■□□□□ 0.36
SS18-218ENST00000581021 MRPL24Q96A35 216 aaKnown RBP17.31■□□□□ 0.36
SS18-218ENST00000581021 DDOQ99489 341 aa17.31■□□□□ 0.36
SS18-218ENST00000581021 TLN2Q9Y4G6 2542 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 IQCMA0A1B0GVH7 501 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 SMAD7O15105 426 aaKnown RBP17.3■□□□□ 0.36
SS18-218ENST00000581021 INHBBP09529 407 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 STOMP27105 288 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 GALK2Q01415 458 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 PLP2Q04941 152 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 MEP1BQ16820 701 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 TBC1D28Q2M2D7 210 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 ZNF101Q8IZC7 436 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 NPEPL1Q8NDH3 523 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 C11orf40Q8WZ69 217 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 FEVQ99581 238 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 SYT3Q9BQG1 590 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 KCNN2Q9H2S1 579 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 C1orf198Q9H425 327 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 CDH20Q9HBT6 801 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 BARX1Q9HBU1 254 aaPredicted RBP17.3■□□□□ 0.36
SS18-218ENST00000581021 ARMC1Q9NVT9 282 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 CMAHPQ9Y471 501 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 TIMM10BQ9Y5J6 103 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 ZFHX3Q15911 3703 aa17.3■□□□□ 0.36
SS18-218ENST00000581021 CSPG4Q6UVK1 2322 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 IGHV4-30-2A0A087WSY4 118 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 NUDT6P53370 316 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 CBX1P83916 185 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.29■□□□□ 0.36
SS18-218ENST00000581021 RAB35Q15286 201 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 TMEM255AQ5JRV8 349 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 JAZF1Q86VZ6 243 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 MAPK1IP1LQ8NDC0 245 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 OR52E2Q8NGJ4 325 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 GIPC3Q8TF64 312 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 ZNRF4Q8WWF5 429 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 SNX18Q96RF0 628 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 NTN4Q9HB63 628 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 RPRD1BQ9NQG5 326 aaKnown RBP17.29■□□□□ 0.36
SS18-218ENST00000581021 TBC1D23Q9NUY8 699 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 REV1Q9UBZ9 1251 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 B9D1Q9UPM9 204 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 PMF1-BGLAPU3KQ54 211 aa17.29■□□□□ 0.36
SS18-218ENST00000581021 C5orf49A4QMS7 147 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 ARRDC5A6NEK1 342 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 C12orf71A8MTZ7 269 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 FAM171A2A8MVW0 826 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 RNF223E7ERA6 249 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 IDH3BO43837 385 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 ATP5HO75947 161 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 TFP02787 698 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 APLNRP35414 380 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 PPOXP50336 477 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 EFNA4P52798 201 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 CCNIQ14094 377 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 MAD2L1BPQ15013 274 aaPredicted RBP17.28■□□□□ 0.36
SS18-218ENST00000581021 KCNMB1Q16558 191 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 RPL13AP3Q6NVV1 102 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 CD300LDQ6UXZ3 194 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 RFPL4BQ6ZWI9 263 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.28■□□□□ 0.36
SS18-218ENST00000581021 ZBTB46Q86UZ6 589 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 CYB561A3Q8NBI2 242 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 SLC26A10Q8NG04 563 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 OR52L1Q8NGH7 329 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 UTP4Q969X6 686 aaKnown RBP17.28■□□□□ 0.36
SS18-218ENST00000581021 BDH2Q9BUT1 245 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 TSSK6Q9BXA6 273 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 RACGAP1Q9H0H5 632 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 SRA1Q9HD15 236 aaKnown RBP17.28■□□□□ 0.36
SS18-218ENST00000581021 ASH2LQ9UBL3 628 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 SPEF1Q9Y4P9 236 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 LHFPL6Q9Y693 200 aa17.28■□□□□ 0.36
SS18-218ENST00000581021 NSD1Q96L73 2696 aaPredicted RBP17.27■□□□□ 0.36
SS18-218ENST00000581021 A0A096LNT2 108 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 TIPRLO75663 272 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 CLPTM1O96005 669 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 PTHP01270 115 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 BMP4P12644 408 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 CCNOP22674 350 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 PCSK6P29122 969 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 NOS3P29474 1203 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 GUCA1AP43080 201 aaPredicted RBP17.27■□□□□ 0.36
SS18-218ENST00000581021 UCP2P55851 309 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 PCBD1P61457 104 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 GK3PQ14409 553 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 ASRGL1Q7L266 308 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 VASH1Q7L8A9 365 aaPredicted RBP17.27■□□□□ 0.36
SS18-218ENST00000581021 SYT9Q86SS6 491 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 LNX2Q8N448 690 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 IQCF1Q8N6M8 205 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 OR10H5Q8NGA6 315 aa17.27■□□□□ 0.36
SS18-218ENST00000581021 OR1J2Q8NGS2 313 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms