RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 FAM120BQ96EK7 910 aaKnown RBP5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 TXNDC15Q96J42 360 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 TSPAN32Q96QS1 320 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 STACQ99469 402 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 GPA33Q99795 319 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 PIGUQ9H490 435 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 BEX1Q9HBH7 125 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 CRLF2Q9HC73 371 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 TMEM181Q9P2C4 612 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 TXNDC16Q9P2K2 825 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 CHRNA9Q9UGM1 479 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 TRAPPC4Q9Y296 219 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC9A8Q9Y2E8 581 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 SNX24Q9Y343 169 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 PAM16Q9Y3D7 125 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 HDGFL3Q9Y3E1 203 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 POLR3HQ9Y535 204 aaPredicted RBP5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 HYDINQ4G0P3 5121 aa5.29□□□□□ -1.56
PPP4R1-216ENST00000580283 PPIAL4EA0A075B759 164 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 PPIAL4CA0A0B4J2A2 164 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 A0A1B0GUS0 222 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 TMEM72A0PK05 275 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 PPIAL4DF5H284 164 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 H0YL77 283 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF500O60304 480 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 SHOX2O60902 331 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 UGT2B17O75795 530 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 AKR7A3O95154 331 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 NDUFA7O95182 113 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 HSPA4LO95757 839 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 KRT6AP02538 564 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 KRT6BP04259 564 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 PPIAL4FP0DN26 164 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 UBL4AP11441 157 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 BCKDHAP12694 445 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF14P17017 642 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 CCNA2P20248 432 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 DCTDP32321 178 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 PGM1P36871 562 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 APOBEC1P41238 236 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 MAGEA12P43365 314 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 KRT6CP48668 564 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 CCR4P51679 360 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 RAG2P55895 527 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ARF1P84077 181 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF154Q13106 437 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 LASP1Q14847 261 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF141Q15928 474 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 SPRNQ5BIV9 151 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 DCST2Q5T1A1 773 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 NOXRED1Q6NXP6 359 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 PAQR6Q6TCH4 344 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 C9orf139Q6ZV77 190 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF771Q7L3S4 317 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 EPHX4Q8IUS5 362 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 KLHL7Q8IXQ5 586 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 TMCO5AQ8N6Q1 288 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 FAM71CQ8NEG0 241 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 OR9K2Q8NGE7 335 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 LINC01006Q8NI28 216 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 MRAPQ8TCY5 172 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 CNOT9Q92600 299 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 CDKL2Q92772 493 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 MS4A4EQ96PG1 132 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ALKBH3Q96Q83 286 aaPredicted RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 SDF2Q99470 211 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 SLC25A33Q9BSK2 321 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF416Q9BWM5 594 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 HOXD1Q9GZZ0 328 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF385DQ9H6B1 395 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 MIEF1Q9NQG6 463 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 SERINC1Q9NRX5 453 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 ZNF224Q9NZL3 707 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 PURGQ9UJV8 347 aaKnown RBP5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 JRKLQ9Y4A0 524 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 CCL27Q9Y4X3 112 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 AUP1Q9Y679 476 aa5.28□□□□□ -1.56
PPP4R1-216ENST00000580283 SH2D7A6NKC9 451 aaPredicted RBP5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 H3BNH8 94 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 RPL36A-HNRNPH2H7BZ11 118 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 EIF1BO60739 113 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 TBX19O60806 448 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 SEC14L2O76054 403 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 RBP1P09455 135 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 UBTFL6P0CB48 400 aaPredicted RBP5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 ZNF12P17014 697 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 MYF6P23409 242 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 PAX7P23759 505 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 CD80P33681 288 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 GLRXP35754 106 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 RPL3P39023 403 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 CENPAP49450 140 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 CLK1P49759 484 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 UBE2NP61088 152 aaKnown RBP5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 SLC35A1P78382 337 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 DR1Q01658 176 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 PAX2Q02962 417 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 PAX8Q06710 450 aa5.27□□□□□ -1.57
PPP4R1-216ENST00000580283 NPRL3Q12980 569 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms