RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GRHPRQ9UBQ7 328 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 UPB1Q9UBR1 384 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 REV1Q9UBZ9 1251 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 ENOPH1Q9UHY7 261 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 ORC6Q9Y5N6 252 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 IER3IP1Q9Y5U9 82 aa16.71■□□□□ 0.27
LIMD2-209ENST00000580222 TEX13CA0A0J9YWL9 993 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 OR6C65A6NJZ3 312 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 SOCS2O14508 198 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 TMPRSS2O15393 492 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 MITFO75030 526 aaPredicted RBP16.7■□□□□ 0.26
LIMD2-209ENST00000580222 KRT33AO76009 404 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 GIFP27352 417 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 NOS3P29474 1203 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 SDHAP31040 664 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 CLRN1P58418 232 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 KRR1Q13601 381 aaKnown RBP16.7■□□□□ 0.26
LIMD2-209ENST00000580222 ARMC4Q5T2S8 1044 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 TSPO2Q5TGU0 170 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 GPR139Q6DWJ6 353 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 ZBTB49Q6ZSB9 765 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 TMEM123Q8N131 208 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 PARP8Q8N3A8 854 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 GPR137CQ8N3F9 429 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 POMGNT2Q8NAT1 580 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 NOXO1Q8NFA2 376 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 OR6N1Q8NGY5 312 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 ZNF566Q969W8 418 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 Q96M85 177 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 USE1Q9NZ43 259 aa16.7■□□□□ 0.26
LIMD2-209ENST00000580222 A6NIZ1 184 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 XKRYO14609 159 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 MGRN1O60291 552 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ZNF432O94892 652 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 IGHG1P01857 330 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ACADSP16219 412 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 PEX2P28328 305 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 CSNK1A1P48729 337 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ALDH3A2P51648 485 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 CHN2P52757 468 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 RAP1BP61224 184 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 RAP1AP62834 184 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 SLC34A1Q06495 639 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 LRRC36Q1X8D7 754 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 LPCAT4Q643R3 524 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 FAM122BQ7Z309 247 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 WDFY1Q8IWB7 410 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ZCCHC24Q8N2G6 241 aaKnown RBP16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ZNF540Q8NDQ6 660 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 OR2T33Q8NG76 320 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ZNF519Q8TB69 540 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 HPS1Q92902 700 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 RASD2Q96D21 266 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 SLC25A44Q96H78 314 aaPredicted RBP16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ALKBH3Q96Q83 286 aaPredicted RBP16.69■□□□□ 0.26
LIMD2-209ENST00000580222 MYOZ1Q9NP98 299 aaPredicted RBP16.69■□□□□ 0.26
LIMD2-209ENST00000580222 B3GAT2Q9NPZ5 323 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 SLC7A10Q9NS82 523 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 ASB6Q9NWX5 421 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 TAS2R16Q9NYV7 291 aa16.69■□□□□ 0.26
LIMD2-209ENST00000580222 NKX1-2Q9UD57 310 aaPredicted RBP16.69■□□□□ 0.26
LIMD2-209ENST00000580222 BHLHE40O14503 412 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 TRMUO75648 421 aaKnown RBP16.68■□□□□ 0.26
LIMD2-209ENST00000580222 ALPLP05186 524 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 PGA4P0DJD7 388 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 PGA3P0DJD8 388 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 CDH2P19022 906 aaPredicted RBP16.68■□□□□ 0.26
LIMD2-209ENST00000580222 SERPINF1P36955 418 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 RAD23AP54725 363 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 DVL1P1P54792 670 aaPredicted RBP16.68■□□□□ 0.26
LIMD2-209ENST00000580222 SNRPD2P62316 118 aaKnown RBP16.68■□□□□ 0.26
LIMD2-209ENST00000580222 ESRRGP62508 458 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 CD47Q08722 323 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 AWAT1Q58HT5 328 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 MESTQ5EB52 335 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 ABHD12BQ7Z5M8 362 aaPredicted RBP16.68■□□□□ 0.26
LIMD2-209ENST00000580222 JAZF1Q86VZ6 243 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 IQCF1Q8N6M8 205 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 OR4Q3Q8NH05 313 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 HDAC2Q92769 488 aaKnown RBP16.68■□□□□ 0.26
LIMD2-209ENST00000580222 ULBP2Q9BZM5 246 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 LINC00470Q9BZP3 86 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 RIBC2Q9H4K1 309 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 SLC17A5Q9NRA2 495 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 MALT1Q9UDY8 824 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 BAIAP2Q9UQB8 552 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 PCDHGB1Q9Y5G3 927 aa16.68■□□□□ 0.26
LIMD2-209ENST00000580222 A0A0G2JK05 382 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 ZNF587BE7ETH6 402 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 LYNX1G3V0Z9 82 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 H7C1C5 153 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 M0R3G1 203 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 IMPA2O14732 288 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 CASQ2O14958 399 aaPredicted RBP16.67■□□□□ 0.26
LIMD2-209ENST00000580222 ARPC3O15145 178 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 UPK3AO75631 287 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 ATP6V1G2O95670 118 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 LYNX1P0DP58 116 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 NR2C1P13056 603 aa16.67■□□□□ 0.26
LIMD2-209ENST00000580222 CRISP1P54107 249 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms